Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0272
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 246 1e-65
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 242 1e-64
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 1e-58
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 198 3e-51
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 107 9e-24
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.70
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 29 2.1
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 2.1
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.1
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.8
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.8
SB_57312| Best HMM Match : RVT_1 (HMM E-Value=0.0069) 29 2.8
SB_51396| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.7
SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.7
SB_40176| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.7
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 29 3.7
SB_55004| Best HMM Match : rve (HMM E-Value=8.7e-30) 29 3.7
SB_45402| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.7
SB_44931| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.7
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 29 3.7
SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 6.5
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 6.5
SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25) 28 6.5
SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 27 8.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 246 bits (601), Expect = 1e-65
Identities = 112/139 (80%), Positives = 124/139 (89%)
Frame = +2
Query: 77 EAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 256
+ PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMN
Sbjct: 3 KTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMN 62
Query: 257 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 436
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 437 VLTKMKETAEAYLGKTVAE 493
VLTKMKETAEAYLG V +
Sbjct: 123 VLTKMKETAEAYLGAKVTD 141
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/34 (88%), Positives = 34/34 (100%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
+AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIIN
Sbjct: 141 DAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIIN 174
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 242 bits (593), Expect = 1e-64
Identities = 111/137 (81%), Positives = 126/137 (91%)
Frame = +2
Query: 77 EAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 256
+APA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+N
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALN 62
Query: 257 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 436
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 437 VLTKMKETAEAYLGKTV 487
VL KMKETAEAYLG+ V
Sbjct: 123 VLGKMKETAEAYLGQKV 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
+AVITVPAYFNDSQRQATKDAGTI+GLNVLR+IN
Sbjct: 141 SAVITVPAYFNDSQRQATKDAGTIAGLNVLRVIN 174
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 223 bits (544), Expect = 1e-58
Identities = 114/164 (69%), Positives = 125/164 (76%), Gaps = 25/164 (15%)
Frame = +2
Query: 77 EAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 256
+APA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMN
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMN 62
Query: 257 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 427
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 428 ----------------------SSMVLTKMKETAEAYLGKTVAE 493
SSMVL KMKETAEAYLG V +
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTD 166
Score = 67.3 bits (157), Expect = 9e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
+AV+TVPAYFNDSQRQATKDAG ISGLNVLRIIN
Sbjct: 234 DAVVTVPAYFNDSQRQATKDAGVISGLNVLRIIN 267
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAG 557
+AV+TVPAYFNDSQRQATKDAG
Sbjct: 166 DAVVTVPAYFNDSQRQATKDAG 187
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 422 EVSSMVLTKMKETAEAYLGKTVAE 493
++SSMVL KMKETAEAYLG V +
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTD 234
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 198 bits (483), Expect = 3e-51
Identities = 95/144 (65%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Frame = +2
Query: 59 KNTKWREAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAA 235
K + + +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD A
Sbjct: 694 KEQREKVGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGA 753
Query: 236 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 415
KNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF
Sbjct: 754 KNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFA 813
Query: 416 PEEVSSMVLTKMKETAEAYLGKTV 487
EE+S+MVLTKMKETAEAYLGK V
Sbjct: 814 AEEISAMVLTKMKETAEAYLGKKV 837
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
+AV+TVPAYFND+QRQATKDAG I+GL V+RIIN
Sbjct: 839 HAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIIN 872
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 107 bits (256), Expect = 9e-24
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 262
+GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q +NP
Sbjct: 34 IGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPK 93
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMV 439
NTI+DAKR IG+ F + K + F V +D G V KG PEE+ V
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 440 LTKMKETAEAYLGKTVAE 493
+ K++ AE L TV +
Sbjct: 154 IKKLRTMAERNLTTTVTK 171
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +3
Query: 495 AVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
AV++VPA F+ QR AT A +++G+ VLR+IN
Sbjct: 172 AVMSVPAEFDIKQRNATVKAASLAGITVLRVIN 204
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 430
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 431 SMVLTKMKETAEAYLGKTVAEC 496
+M+ T++K TAE L V +C
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDC 199
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 244
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 492 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
+ VI+VP+Y+ D QR+ DA +GLN LR++N
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMN 231
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +3
Query: 489 QNAVITVPAYFNDSQRQATKDAGTISGLNVL 581
+ AVITVPA+FND+QRQATKDAGTI+GL+VL
Sbjct: 39 KRAVITVPAHFNDAQRQATKDAGTIAGLDVL 69
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +2
Query: 377 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTV 487
I V GE ++F PE++S++VL ++K AEA+LG+ V
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAV 38
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 140 GKVEIIANDQGNRTTPSYVAFTDTERLI 223
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 489 QNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 593
++ V+TVP +FN ++R+A A + GLNVL+I+N
Sbjct: 106 KDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMN 140
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 149 EIIANDQGNRTTPSYVAFT-DTERL 220
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -1
Query: 492 SATVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLIL--GLP 364
SATV R +S+VS V T L+ K+L + + TLI+ GLP
Sbjct: 114 SATVHKRRSSSVSSHIVDTWRLSKDEAKILPTVIVGTLIIVFGLP 158
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 157 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 327
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 257 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 159
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 275 RILCCWGSSPPGSWRH 228
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 275 RILCCWGSSPPGSWRH 228
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_57312| Best HMM Match : RVT_1 (HMM E-Value=0.0069)
Length = 503
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 186 GVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPTAGASRHFVFLISL 49
G+ + W++ M WKT T + S+P A RH I+L
Sbjct: 60 GISIEEWNILMRRWGDTWKTVTDAWNGYHSVPLREADRHLTTFITL 105
>SB_51396| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 357
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 171 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 230
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 231 KVLGTIETVVSYHGNSCTTSVVVTNHKR 258
>SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 616
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 301 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 360
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 361 KVLGTIETVVSYHGNSCTTSVVVTNHKR 388
>SB_40176| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 310
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 124 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 183
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 184 KVLGTIETVVSYHGNSCTTSVVVTNHKR 211
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 813 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 872
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 873 KVLGTIETVVSYHGNSCTTSVVVTNHKR 900
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 119 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 178
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 179 KVLGTIETVVSYHGNSCTTSVVVTNHKR 206
>SB_55004| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 682
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 8 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 67
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 68 KVLGTIETVVSYHGNSCTTSVVVTNHKR 95
>SB_45402| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 388
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 301 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 360
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 361 KVLGTIETVVSYHGNSCTTSVVVTNHKR 388
>SB_44931| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 388
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 301 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELDLTSFTGHKL 360
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 361 KVLGTIETVVSYHGNSCTTSVVVTNHKR 388
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 465 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 286
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 285 RLASNIVL 262
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 328 GNKVPPITVNLEVDGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELGLTSFTGHKL 387
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 388 KVLGTIETVVSYHGNSCTTSVVVTNHKR 415
>SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1748
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +2
Query: 293 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDK--TFFPEEVSSMVLTKMKETAE 466
G K TV ++ P E D G P ++ + +F + S + LT
Sbjct: 259 GNKVPPITVHLEVYGRPIEFEIDTGSPYTLISEETAKTLPSFHKMKSSELGLTSFTGHKL 318
Query: 467 AYLGKTVAECSYHGSRVLQ*LSKTSHKR 550
LG SYHG+ + T+HKR
Sbjct: 319 KVLGTIETVVSYHGNSCTTPVVVTNHKR 346
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 202 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 342
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 339 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 193
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25)
Length = 472
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 538 CL*ESLKYAGTVITAFCHSFAKISF 464
C+ + LK TVI AF HS AKI F
Sbjct: 433 CMGQLLKQKSTVIRAFRHSKAKIYF 457
>SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 PNNTIFDAKRLIGRKFEDATVQA---DMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 427
P N ++ ++GR + Q + W F S+ G P V + +D FP +
Sbjct: 816 PTN-VYCIADVVGRPLSEVLQQTGVIQLTEWEF---SEAGHPFTSVRRRKKDSIRFPHSI 871
Query: 428 SSMVLTKMKETAEAYLGKTVAECSYHGSRVL 520
+S ++ E + + V +C+ HG L
Sbjct: 872 ASSEDSQYPEGRD-LAARFVGKCARHGDESL 901
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 444 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 268
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 267 VLLGFIATWFL 235
G I W L
Sbjct: 809 SADGTIRIWDL 819
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,241,741
Number of Sequences: 59808
Number of extensions: 447799
Number of successful extensions: 1381
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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