Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0271
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022436-1|AAY54852.1|  472|Drosophila melanogaster IP11710p pro...   137   1e-32
AE014134-3202|AAF53874.1|  472|Drosophila melanogaster CG10721-P...   137   1e-32
AE014134-834|AAF52199.2|  595|Drosophila melanogaster CG33113-PF...    31   0.95 
M20630-1|AAA28397.1|  675|Drosophila melanogaster protein ( D.me...    29   3.8  
L23543-1|AAC37214.1|  675|Drosophila melanogaster brown protein ...    29   3.8  
L05635-1|AAA28398.1|  675|Drosophila melanogaster brown protein ...    29   3.8  
AE013599-3619|AAF47020.3|  675|Drosophila melanogaster CG17632-P...    29   3.8  
V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L prot...    29   6.7  
AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p pro...    29   6.7  
AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA ...    29   6.7  
BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p pro...    28   8.9  
AY060861-1|AAL28409.1|  441|Drosophila melanogaster GM03427p pro...    28   8.9  
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA...    28   8.9  

>BT022436-1|AAY54852.1|  472|Drosophila melanogaster IP11710p
           protein.
          Length = 472

 Score =  137 bits (332), Expect = 1e-32
 Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
 Frame = +3

Query: 72  NLEIIYDSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISDSKNSKRVLGIRDTES 251
           + + + D L H+++ +    T  G+ I+Y  +C+CTGG P+L S    +  V+GIRDT+S
Sbjct: 70  SFQTLVDRLDHINSREHCIRTKAGLEIKYRYLCLCTGGTPKLFSGKVVNPLVIGIRDTDS 129

Query: 252 VKDFQQKLKTGRRMVIVGNGGIASDIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQET 431
           V+  Q+KL T + ++I+GNGGIAS++ +    +   WV++D +ISATF+DPGAAEFF   
Sbjct: 130 VQLLQRKLATAKDVLILGNGGIASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIA 189

Query: 432 FKNENERKNQNTV-LRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLE 569
               N + +   V ++R  YSE   L     N   AALGPDW+R ++
Sbjct: 190 MNECNAKDSSPVVAIKRMRYSE--VLPKEQTNNHGAALGPDWHRSVD 234


>AE014134-3202|AAF53874.1|  472|Drosophila melanogaster CG10721-PA
           protein.
          Length = 472

 Score =  137 bits (332), Expect = 1e-32
 Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
 Frame = +3

Query: 72  NLEIIYDSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISDSKNSKRVLGIRDTES 251
           + + + D L H+++ +    T  G+ I+Y  +C+CTGG P+L S    +  V+GIRDT+S
Sbjct: 70  SFQTLVDRLDHINSREHCIRTKAGLEIKYRYLCLCTGGTPKLFSGKVVNPLVIGIRDTDS 129

Query: 252 VKDFQQKLKTGRRMVIVGNGGIASDIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQET 431
           V+  Q+KL T + ++I+GNGGIAS++ +    +   WV++D +ISATF+DPGAAEFF   
Sbjct: 130 VQLLQRKLATAKDVLILGNGGIASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIA 189

Query: 432 FKNENERKNQNTV-LRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLE 569
               N + +   V ++R  YSE   L     N   AALGPDW+R ++
Sbjct: 190 MNECNAKDSSPVVAIKRMRYSE--VLPKEQTNNHGAALGPDWHRSVD 234


>AE014134-834|AAF52199.2|  595|Drosophila melanogaster CG33113-PF,
           isoform F protein.
          Length = 595

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 186 IPRLISDSKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASDIVHATSG 347
           + RL +D+K++K  L  +  +   DF+  L+   + V  G  G+ +D ++A  G
Sbjct: 70  VQRLAADAKDAKLDLDTKFAQKTDDFEDFLRDAGKEVKQGISGLTTDFMNAERG 123


>M20630-1|AAA28397.1|  675|Drosophila melanogaster protein (
           D.melanogaster brown(bw) mRNA encoding brown protein,
           complete cds. ).
          Length = 675

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 411 AEFFQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRG 590
           A+F+ +T  ++  ++N   VLR     E D L S    L + +   D+ + ++N K  R 
Sbjct: 339 ADFYLKTLADKEGKENAGAVLRAKYEHETDGLYS-GSWLLARSYSGDYLKHVQNFKKIRW 397

Query: 591 VQELEIV 611
           + ++ ++
Sbjct: 398 IYQVYLL 404


>L23543-1|AAC37214.1|  675|Drosophila melanogaster brown protein
           protein.
          Length = 675

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 411 AEFFQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRG 590
           A+F+ +T  ++  ++N   VLR     E D L S    L + +   D+ + ++N K  R 
Sbjct: 339 ADFYLKTLADKEGKENAGAVLRAKYEHETDGLYS-GSWLLARSYSGDYLKHVQNFKKIRW 397

Query: 591 VQELEIV 611
           + ++ ++
Sbjct: 398 IYQVYLL 404


>L05635-1|AAA28398.1|  675|Drosophila melanogaster brown protein
           protein.
          Length = 675

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 411 AEFFQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRG 590
           A+F+ +T  ++  ++N   VLR     E D L S    L + +   D+ + ++N K  R 
Sbjct: 339 ADFYLKTLADKEGKENAGAVLRAKYEHETDGLYS-GSWLLARSYSGDYLKHVQNFKKIRW 397

Query: 591 VQELEIV 611
           + ++ ++
Sbjct: 398 IYQVYLL 404


>AE013599-3619|AAF47020.3|  675|Drosophila melanogaster CG17632-PA
           protein.
          Length = 675

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 411 AEFFQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRG 590
           A+F+ +T  ++  ++N   VLR     E D L S    L + +   D+ + ++N K  R 
Sbjct: 339 ADFYLKTLADKEGKENAGAVLRAKYEHETDGLYS-GSWLLARSYSGDYLKHVQNFKKIRW 397

Query: 591 VQELEIV 611
           + ++ ++
Sbjct: 398 IYQVYLL 404


>V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L
           protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
 Frame = +3

Query: 291 MVIVGNGGIASDIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQETFKNENERKNQNTV 470
           M+I+G  G++        G+  VW+  +D      +DP A +  ++ F    ER  ++ V
Sbjct: 377 MIILGLPGVSVTYQGEEMGMTDVWISWED-----TVDPQACQSNEQEF----ERLTRDPV 427

Query: 471 LRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQELEI-VYK 617
                +S+E +    N ++    +  ++  KL N+K +RG+    + VYK
Sbjct: 428 RTPFQWSDEVNAGFSNASVTWLPVASNY--KLVNVKKERGIALSHLNVYK 475


>AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
 Frame = +3

Query: 291 MVIVGNGGIASDIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQETFKNENERKNQNTV 470
           M+I+G  G++        G+  VW+  +D      +DP A +  ++ F    ER  ++ V
Sbjct: 377 MIILGLPGVSVTYQGEEMGMTDVWISWED-----TVDPQACQSNEQEF----ERLTRDPV 427

Query: 471 LRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQELEI-VYK 617
                +S+E +    N ++    +  ++  KL N+K +RG+    + VYK
Sbjct: 428 RTPFQWSDEVNAGFSNASVTWLPVASNY--KLVNVKKERGIALSHLNVYK 475


>AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
 Frame = +3

Query: 291 MVIVGNGGIASDIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQETFKNENERKNQNTV 470
           M+I+G  G++        G+  VW+  +D      +DP A +  ++ F    ER  ++ V
Sbjct: 377 MIILGLPGVSVTYQGEEMGMTDVWISWED-----TVDPQACQSNEQEF----ERLTRDPV 427

Query: 471 LRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQELEI-VYK 617
                +S+E +    N ++    +  ++  KL N+K +RG+    + VYK
Sbjct: 428 RTPFQWSDEVNAGFSNASVTWLPVASNY--KLVNVKKERGIALSHLNVYK 475


>BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p protein.
          Length = 1434

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 292  ILRPVFNFC*KSFTDSVSLMPSTLLLFLESEISLGIPPVQIQ 167
            +L PV  FC    +  + LMPST +  L++ IS+ +P +Q++
Sbjct: 1257 VLNPVTEFCDLVPSYQLPLMPSTEVTLLQATISV-LPRLQLE 1297


>AY060861-1|AAL28409.1|  441|Drosophila melanogaster GM03427p
           protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 292 ILRPVFNFC*KSFTDSVSLMPSTLLLFLESEISLGIPPVQIQ 167
           +L PV  FC    +  + LMPST +  L++ IS+ +P +Q++
Sbjct: 128 VLNPVTEFCDLVPSYQLPLMPSTEVTLLQATISV-LPRLQLE 168


>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
            protein.
          Length = 1784

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 292  ILRPVFNFC*KSFTDSVSLMPSTLLLFLESEISLGIPPVQIQ 167
            +L PV  FC    +  + LMPST +  L++ IS+ +P +Q++
Sbjct: 1471 VLNPVTEFCDLVPSYQLPLMPSTEVTLLQATISV-LPRLQLE 1511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,882,310
Number of Sequences: 53049
Number of extensions: 547205
Number of successful extensions: 1251
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)