Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0271
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g63940.4 68414.m07242 monodehydroascorbate reductase, putativ... 48 7e-06
At1g63940.3 68414.m07239 monodehydroascorbate reductase, putativ... 48 7e-06
At1g63940.2 68414.m07240 monodehydroascorbate reductase, putativ... 48 7e-06
At1g63940.1 68414.m07241 monodehydroascorbate reductase, putativ... 48 7e-06
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont... 29 3.3
At4g20190.1 68417.m02952 hypothetical protein 27 7.6
>At1g63940.4 68414.m07242 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 482
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 36 KQRPPPWQKIHPNLEIIY-DSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISD-- 206
+++ P W K +E+IY D + D EKQ TD G ++Y + I TG D
Sbjct: 125 ERQTPDWYK-EKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPDKI 183
Query: 207 SKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASDIVHATS--GIEKVWVIRDDY 380
+ V IR+ L +++VIVG G I ++ A ++ V +D
Sbjct: 184 GGHLPGVHYIREVADADSLIASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQ 243
Query: 381 ISATFIDPGAAEFFQETFK 437
+ P A+ ++E ++
Sbjct: 244 LLQRLFTPSLAQKYEELYR 262
>At1g63940.3 68414.m07239 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 416
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 36 KQRPPPWQKIHPNLEIIY-DSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISD-- 206
+++ P W K +E+IY D + D EKQ TD G ++Y + I TG D
Sbjct: 125 ERQTPDWYK-EKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPDKI 183
Query: 207 SKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASDIVHATS--GIEKVWVIRDDY 380
+ V IR+ L +++VIVG G I ++ A ++ V +D
Sbjct: 184 GGHLPGVHYIREVADADSLIASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQ 243
Query: 381 ISATFIDPGAAEFFQETFK 437
+ P A+ ++E ++
Sbjct: 244 LLQRLFTPSLAQKYEELYR 262
>At1g63940.2 68414.m07240 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 493
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 36 KQRPPPWQKIHPNLEIIY-DSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISD-- 206
+++ P W K +E+IY D + D EKQ TD G ++Y + I TG D
Sbjct: 132 ERQTPDWYK-EKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPDKI 190
Query: 207 SKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASDIVHATS--GIEKVWVIRDDY 380
+ V IR+ L +++VIVG G I ++ A ++ V +D
Sbjct: 191 GGHLPGVHYIREVADADSLIASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQ 250
Query: 381 ISATFIDPGAAEFFQETFK 437
+ P A+ ++E ++
Sbjct: 251 LLQRLFTPSLAQKYEELYR 269
>At1g63940.1 68414.m07241 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 486
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 36 KQRPPPWQKIHPNLEIIY-DSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISD-- 206
+++ P W K +E+IY D + D EKQ TD G ++Y + I TG D
Sbjct: 125 ERQTPDWYK-EKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPDKI 183
Query: 207 SKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASDIVHATS--GIEKVWVIRDDY 380
+ V IR+ L +++VIVG G I ++ A ++ V +D
Sbjct: 184 GGHLPGVHYIREVADADSLIASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQ 243
Query: 381 ISATFIDPGAAEFFQETFK 437
+ P A+ ++E ++
Sbjct: 244 LLQRLFTPSLAQKYEELYR 262
>At3g17920.1 68416.m02282 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 962
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 450 RKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQELEIVYK 617
RK I SEE+S +N + +SA+ P+ K ENIKSD ++ K
Sbjct: 356 RKKTKIYRLASIDSEEESTY-VNSDQESASCEPETQSKEENIKSDHEADVFGLICK 410
>At4g20190.1 68417.m02952 hypothetical protein
Length = 389
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 405 GAAEFFQETFKNENERKNQNTVLRRHIYSEED 500
G FF +T N++ R N NT + I S ED
Sbjct: 177 GNNSFFSKTESNKSNRSNSNTANSKSINSFED 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,719
Number of Sequences: 28952
Number of extensions: 274430
Number of successful extensions: 736
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -