Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0270
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 461 QGGRGE*SRYNHYFIAVSVPGG 396
           QG +GE   YNHY    S  GG
Sbjct: 379 QGYQGEHPNYNHYGYHYSGDGG 400


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 461 QGGRGE*SRYNHYFIAVSVPGG 396
           QG +GE   YNHY    S  GG
Sbjct: 327 QGYQGEHPNYNHYGYHYSGDGG 348


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 309 VYYQR-WQSVHLDKKML 262
           VY  R WQ +HL+KK +
Sbjct: 531 VYNHRPWQQLHLNKKQI 547


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 417 CRFGAGRAHYIEWIYISTLERQT*LSHNNCFVHK*VVYYQRWQSVHL 277
           C F      Y+ ++    +  Q  LSH + ++    +  Q W SVH+
Sbjct: 189 CSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWLVWLLSQAWISVHI 235


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 417 CRFGAGRAHYIEWIYISTLERQT*LSHNNCFVHK*VVYYQRWQSVHL 277
           C F      Y+ ++    +  Q  LSH + ++    +  Q W SVH+
Sbjct: 422 CSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWLVWLLSQAWISVHI 468


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 417 CRFGAGRAHYIEWIYISTLERQT*LSHNNCFVHK*VVYYQRWQSVHL 277
           C F      Y+ ++    +  Q  LSH + ++    +  Q W SVH+
Sbjct: 422 CSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWLVWLLSQAWISVHI 468


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 171 VNY*PLFNAGFEPYSL 218
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 287 LCIWTKKCYRYVNTD 243
           L IWT KC R   T+
Sbjct: 479 LHIWTPKCERLARTE 493


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 287 LCIWTKKCYRYVNTD 243
           L IWT KC R   T+
Sbjct: 479 LHIWTPKCERLARTE 493


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 287 LCIWTKKCYRYVNTD 243
           L IWT KC R   T+
Sbjct: 479 LHIWTPKCERLARTE 493


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 287 LCIWTKKCYRYVNTD 243
           L IWT KC R   T+
Sbjct: 479 LHIWTPKCERLARTE 493


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 308 TTHLCTKQLLWLSHV 352
           TTH C K++L LS +
Sbjct: 23  TTHNCLKKVLLLSQI 37


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 129 CQWNTKSKIRFSDLPILFKSQ 67
           CQ++T+S  +F+D    F  Q
Sbjct: 196 CQYDTESSYQFNDPQFNFNYQ 216


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 129 CQWNTKSKIRFSDLPILFKSQ 67
           CQ++T+S  +F+D    F  Q
Sbjct: 216 CQYDTESSYQFNDPQFNFNYQ 236


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = -1

Query: 305 IIKGGNLCIWTKK 267
           ++ GG +C+W+++
Sbjct: 504 LVLGGEVCLWSEQ 516


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,572
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)