Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0268
         (627 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0339 - 24513699-24516827                                         29   4.0  
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251...    28   5.3  
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068...    28   7.0  
01_06_0237 + 27770777-27771120,27771209-27771438,27771951-277720...    28   7.0  

>04_04_0339 - 24513699-24516827
          Length = 1042

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 319 IC*HVYAIIFQLLWGMNLEKW*LKLE 242
           +C   + I+   +WG NL+KW L +E
Sbjct: 252 LCGRKFLIVLDDVWGQNLQKWKLLIE 277


>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
            30326409-30326798,30326896-30330060
          Length = 2144

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 163  FSLKIDDKLVTSHEDVANAFEKFFSDIPVSTTTSLNSSPTAAEILLHKHVNK 318
            FSL  + K V+  +D      K F+ +P+    SL+       +LL  ++++
Sbjct: 1022 FSLSEEFKYVSVRQDEKMELAKLFNCVPIPVKESLDEPSAKINVLLQAYISR 1073


>11_04_0165 +
          14305885-14306007,14306538-14306642,14306792-14306869,
          14307710-14307757,14308173-14308314,14308394-14308464,
          14309210-14309306,14309517-14309728,14311995-14312267
          Length = 382

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 9  GGGALN*WIPGLQAAKSLHLSDLIKNA 89
          GGGA+N W PG  AA S  + D +K A
Sbjct: 6  GGGAVN-WFPGHMAAASRAIRDRLKLA 31


>01_06_0237 +
           27770777-27771120,27771209-27771438,27771951-27772092,
           27772266-27772281
          Length = 243

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 139 KVRNSHQEFSLKIDDKLVTSHEDVANAFEKFFS 237
           KV      +  K+D K+ +S+ED++ A EK FS
Sbjct: 155 KVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFS 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,294,062
Number of Sequences: 37544
Number of extensions: 253457
Number of successful extensions: 605
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)