Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0268
(627 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 62 8e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 62 8e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 2e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 2e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 1e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 57 2e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 56 4e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 52 5e-07
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 50 3e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 3e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 49 6e-06
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 47 2e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 46 3e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 46 3e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 46 3e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 46 3e-05
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 46 3e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 45 7e-05
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 44 2e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 42 7e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 41 0.002
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 36 0.034
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 29 5.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 61.7 bits (143), Expect = 8e-10
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 GISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGS-TDDPSNYRPIS 588
GI LK++ H+V+I N C++ G FP K +K++P K G D+P +YRPIS
Sbjct: 483 GIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPIS 542
Query: 589 VLPTLSKIFEKII 627
+L LSKI EK+I
Sbjct: 543 LLSGLSKILEKLI 555
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 61.7 bits (143), Expect = 8e-10
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 GISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGS-TDDPSNYRPIS 588
GI LK++ H+V+I N C++ G FP K +K++P K G D+P +YRPIS
Sbjct: 431 GIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPIS 490
Query: 589 VLPTLSKIFEKII 627
+L LSKI EK+I
Sbjct: 491 LLSGLSKILEKLI 503
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +PD KH++V K G S +DP +YRPIS+
Sbjct: 388 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 447
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 448 LSGLSKMFERLL 459
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +PD KH++V K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 564 LSGLSKMFERLL 575
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +PD KH++V K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 564 LSGLSKMFERLL 575
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +PD KH++V K G S +DP +YRPIS+
Sbjct: 466 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 525
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 526 LSGLSKMFERLL 537
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +PD KH++V K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 564 LSGLSKMFERLL 575
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +P+ KH++V K G S ++P +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISL 563
Query: 592 LPTLSKIFEKII 627
L LSKIFE+++
Sbjct: 564 LSGLSKIFERLL 575
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/72 (36%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSG-STDDPSNYRPISV 591
I+ +++K++ +L+ I+N +R G +P+ KH++V K G S+++P +YRPIS+
Sbjct: 516 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISL 575
Query: 592 LPTLSKIFEKII 627
L LSK+FE+++
Sbjct: 576 LSGLSKMFERLL 587
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 56.0 bits (129), Expect = 4e-08
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 391 KNTADLWGISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD--D 564
+ + L GI+ I K+V I HL S+F+ CIR G FP K +V+ K D +
Sbjct: 449 RRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCE 508
Query: 565 PSNYRPISVLPTLSKIFEKII 627
PS+YR I +LP K+ E I+
Sbjct: 509 PSSYRGICLLPVFGKVLEAIM 529
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 52.4 bits (120), Expect = 5e-07
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 LVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD-DPSNYRPISVLPTLSKIFEKII 627
LV IFN + G FP K + +I K+G T D +YRPIS+LP+L KI E++I
Sbjct: 279 LVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLI 334
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD-DPSNYRPISVLPTLSKIFEKII 627
H+ +FN + G FP K S ++ K G PS+YRPIS+L LSK+FEK++
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKML 526
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD-DPSNYRPISVLPTLSKIFEKII 627
H+ +FN + G FP K S ++ K G PS+YRPIS+L LSK+FEK++
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKML 526
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 48.8 bits (111), Expect = 6e-06
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 LVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD-DPSNYRPISVLPTLSKIFEKII 627
L IFN + G FP K + +I K+G T D +YRP S+LP+L KI E++I
Sbjct: 477 LALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLI 532
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTD-DPSNYRPISVLPTLSKIFEKII 627
++ +FN +R FP K + K G + +P++YRPIS+LP++SK+FE++I
Sbjct: 474 YITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLI 530
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSN-YRPISVLPTLSKIFEKII 627
+L+ I+N+ +R G FP+ KH+ + K G + N YRPIS+L LSK+ E+I+
Sbjct: 75 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 131
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSN-YRPISVLPTLSKIFEKII 627
+L+ I+N+ +R G FP+ KH+ + K G + N YRPIS+L LSK+ E+I+
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSN-YRPISVLPTLSKIFEKII 627
+L+ I+N+ +R G FP+ KH+ + K G + N YRPIS+L LSK+ E+I+
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSN-YRPISVLPTLSKIFEKII 627
+L+ I+N+ +R G FP+ KH+ + K G + N YRPIS+L LSK+ E+I+
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGST-DDPSNYRPISV 591
+S +LK++ + L+ IFN + G +P + + +IP K D ++YRPIS+
Sbjct: 459 VSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISL 518
Query: 592 LPTLSKIFEKII 627
L L K EKII
Sbjct: 519 LSCLGKTLEKII 530
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDD-PSNYRPISVLPTLSKIFEKII 627
+L I+N +R FP K + ++ K G ++ P +YRPIS+L +LSK++E++I
Sbjct: 475 YLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLI 531
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 460 HLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDD-PSNYRPISVLPTLSKIFEKII 627
++ +FN + G FP K K+I K G S+YRPIS+L +SK+FEK +
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCL 528
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 475 FNDCIRCGVFPDLMKHSKVIPFFKS-GSTDDPSNYRPISVLPTLSKIFEKII 627
F C+ GVFP K K++ K G + P +YRP+ +L + K+FE+I+
Sbjct: 445 FQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERIL 496
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 472 IFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSNYRPISVLPTLSKIFEK 621
+FN + G FP K S +I K +YRPIS+L LSK+FEK
Sbjct: 16 LFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEK 65
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 ISVKILKSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDP-SNYRPISV 591
IS +++K+ + +FN+ + P K S +IP K + S+YRPIS+
Sbjct: 455 ISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSSYRPISL 513
Query: 592 LPTLSKIFEKII 627
++KI +KII
Sbjct: 514 NCCIAKILDKII 525
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 433 KSVIDIIAPHLVSIFNDCIRCGVFPDLMKHSKVIPFFKSGSTDDPSNYRPISVLPTLSKI 612
KS ++ + ++ I N + CG P ++ ++ + K+ + P ++RPISV L +
Sbjct: 368 KSAREVPSGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQ 427
Query: 613 FEKII 627
I+
Sbjct: 428 LNAIL 432
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,591,247
Number of Sequences: 53049
Number of extensions: 451708
Number of successful extensions: 1238
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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