Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0266
(558 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 2.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 3.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.7
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 6.4
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 6.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 226 IRSTLLKQLSKFTLVAYPVWGVPLD 300
+RS + +LS LV +PVW V L+
Sbjct: 889 LRSLEILRLSGNRLVTFPVWQVTLN 913
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 298 PAELPRLDMPLM*TSTTASGVLNGSVINNP 209
P + P + +P+ STT +GV+ VI P
Sbjct: 823 PQQNPYMFLPVSYMSTTMAGVIYPPVIGTP 852
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 337 YEPDTFDVLKHRINQRFTNGGNKLVNINLSDSDQLLSYSNVL 462
+E D+F V KH R + G N+ + + + S V+
Sbjct: 707 WEGDSFKVSKHEEVSRTSTAGQFPTNVATTVTSMSIDQSTVI 748
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 268 VAYPVWGVPLDFKSKKYPLVVDEYEPDTF 354
V + + GVP + K YP DE PD F
Sbjct: 199 VEWDILGVPAERHKKYYP-CCDEPYPDIF 226
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 32 VWVFLISSIIG 64
+W+F I+SI+G
Sbjct: 490 LWIFTIASIVG 500
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 250 LSKFTL-VAYPVWGVPLDFKSKKYPLVVDEYEPDTFDVLKHR 372
LS F L V + + VP + YP + Y TF++ R
Sbjct: 206 LSDFYLSVEWDILEVPASRNEEYYPCCTEPYSDITFNITMRR 247
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 304 KSKKYPLVVDEYEPDTF 354
++K YPL VD++ TF
Sbjct: 66 RTKNYPLDVDQWHNKTF 82
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 155 LLKDSRKFYWNQRNLTTQD 99
LLKD K +W +R L D
Sbjct: 179 LLKDPVKEFWERRTLQISD 197
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 155 LLKDSRKFYWNQRNLTTQD 99
LLKD K +W +R L D
Sbjct: 232 LLKDPVKEFWERRTLQISD 250
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 295 LDFKSKKYPLVVDEYEP 345
+ ++ KYP+VV Y P
Sbjct: 10 MSLRALKYPMVVHVYHP 26
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 295 LDFKSKKYPLVVDEYEP 345
+ ++ KYP+VV Y P
Sbjct: 10 MSLRALKYPMVVHVYHP 26
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 135 VLLEPEKLNDSGLWRMLSSQTPLIPIIEEIKK 40
V L+P K + S WR L + P + KK
Sbjct: 440 VELQPVKSSKSSGWRKLRNIVHWTPFFQTYKK 471
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 8.4
Identities = 4/15 (26%), Positives = 12/15 (80%)
Frame = +2
Query: 32 VWVFLISSIIGISGV 76
+W+F ++ ++G +G+
Sbjct: 518 LWIFTLAVVVGTAGI 532
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,053
Number of Sequences: 438
Number of extensions: 2921
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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