Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0264
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.2  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 52 KNNMYLLKNKYQLI 93
          KNN YL+ NKY L+
Sbjct: 25 KNNTYLVLNKYLLV 38


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -2

Query: 557 EPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVD 459
           +PY+ D +    +GE + +++  C       VD
Sbjct: 420 QPYSRDSYNLAGMGETIEDLLHFCRTMYSMKVD 452


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 498 NFEHVFADLHEFP 536
           N+ H  AD+HE P
Sbjct: 297 NYHHRTADIHEMP 309


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 498 NFEHVFADLHEFP 536
           N+ H  AD+HE P
Sbjct: 297 NYHHRTADIHEMP 309


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 498 NFEHVFADLHEFP 536
           N+ H  AD+HE P
Sbjct: 297 NYHHRTADIHEMP 309


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 498 NFEHVFADLHEFP 536
           N+ H  AD+HE P
Sbjct: 297 NYHHRTADIHEMP 309


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 498 NFEHVFADLHEFP 536
           N+ H  AD+HE P
Sbjct: 297 NYHHRTADIHEMP 309


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 115 KQITERFEKNVNVGI 159
           K+  E+F KN+ +GI
Sbjct: 424 KKFYEQFSKNIKLGI 438


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -1

Query: 423 IEYIEKISSNRERRRAQVVRQFS 355
           ++YI+++  NR+     ++R  S
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVS 136


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -1

Query: 423 IEYIEKISSNRERRRAQVVRQFS 355
           ++YI+++  NR+     ++R  S
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVS 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,123
Number of Sequences: 336
Number of extensions: 2021
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)