Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0264
         (570 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1072 + 27365834-27365945,27366360-27366464,27366844-273669...    54   6e-08
09_06_0275 + 21976990-21977140,21977239-21977388,21977775-219779...    53   1e-07
09_06_0276 + 21980147-21980285,21980369-21980550,21980867-219811...    50   2e-06
05_04_0252 - 19386942-19387048,19388332-19388947                       31   0.85 
04_04_0891 + 29130494-29130904,29131043-29131102,29131203-291314...    28   4.6  

>06_03_1072 +
           27365834-27365945,27366360-27366464,27366844-27366929,
           27367445-27367631,27368031-27368142,27368235-27368337,
           27368424-27368469,27368670-27368708,27368803-27368959,
           27369031-27369133,27369337-27369453,27369880-27369957,
           27370044-27370145,27370252-27370345,27370432-27370542,
           27370643-27370707,27370949-27371097,27371349-27371581,
           27371778-27371908,27372016-27372126,27372210-27372326
          Length = 785

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 396
           + G+ PY+ED WK ++IGE  F  +  C RC M  +  ++G    + EPL TL  YR+
Sbjct: 688 ISGSSPYSEDNWKKLRIGEACFTSMGGCNRCQMINLHQDSGQVLKSKEPLATLASYRR 745


>09_06_0275 +
           21976990-21977140,21977239-21977388,21977775-21977951,
           21978073-21978161,21978259-21978323,21978445-21978547,
           21979042-21979152,21979306-21979374,21979558-21979614
          Length = 323

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 399
           V+G  PY+ED WK +KI +  F+ +K C RC + T++ E G+    +EP  TL  +R
Sbjct: 214 VDGCHPYSEDLWKTIKINKLTFQGVKLCNRCKVPTINQENGI--LGTEPTETLLTFR 268


>09_06_0276 +
           21980147-21980285,21980369-21980550,21980867-21981137,
           21981263-21981351,21981474-21981538,21981656-21981758,
           21982215-21982325,21982441-21982509,21982553-21982687
          Length = 387

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 399
           V+G  PY+ED WK +KIG+  F  +K C RC + T++ + G+     EP   L+  R
Sbjct: 252 VDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGI--PGEEPTEALQALR 306


>05_04_0252 - 19386942-19387048,19388332-19388947
          Length = 240

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 417 IQWFRSRIANASFWID--CGHHASRARLYNFEHVFADLH 527
           I WFR   A A+  ID  CGH A       +E VFA LH
Sbjct: 38  IGWFRGEFAAANAVIDALCGHLAQIGGDAEYEAVFAALH 76


>04_04_0891 +
           29130494-29130904,29131043-29131102,29131203-29131409,
           29131520-29131645,29131767-29131823,29131946-29132014
          Length = 309

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 420 QWFRSRIANASFW-IDCGHHASRARLYNFEHVFADLHEFPSVFSVRLSAFH 569
           QW    + +AS W +   HH +R   +    VFA  +  P++  +    FH
Sbjct: 165 QWAHRSLWHASLWHMHESHHRAREGPFELNDVFAITNAVPAISLLAYGFFH 215


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,228,073
Number of Sequences: 37544
Number of extensions: 180707
Number of successful extensions: 476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)