Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0264
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical pr...    63   1e-10
Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical pr...    60   8e-10
AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical ...    60   1e-09
Z69793-3|CAA93672.2|  709|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical...    27   7.2  
AF098500-1|AAC67400.2|  311|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical
           protein F53E10.1 protein.
          Length = 339

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 399
           +EG   + ED W  ++IGE   E   PCTRCV+TTVDPE G  +   +PL  L+++R
Sbjct: 239 IEGCAAWDEDKWAEIRIGEAHLECFAPCTRCVLTTVDPEKGEMSKEMQPLKKLREFR 295


>Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.7 protein.
          Length = 339

 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 30/96 (31%), Positives = 46/96 (47%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQIX 390
           +EG   + ED W  ++IG+   E   PCTRCV+TTVDP  G  +   +PL  L+++R + 
Sbjct: 239 IEGCAAWDEDKWAEIRIGDAHLECFAPCTRCVLTTVDPVKGEMSKEMQPLKKLREFRLVP 298

Query: 389 XXXXXXXXXXXXRMGVQLALRSKPGGTVSLNDPIYV 282
                         GV   L ++  G +     +YV
Sbjct: 299 DGKMRKVHMESPVFGVYAGLVNE--GYIHTGQTVYV 332


>AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical
           protein F56A11.5 protein.
          Length = 340

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 399
           V+    + ED W  ++IG+   +  KPCTRC++TTV+PETG ++   +PL  L+++R
Sbjct: 241 VDDCAAWDEDKWLDLRIGDVEMQCFKPCTRCILTTVNPETGTKDKDMQPLKKLREFR 297


>Z69793-3|CAA93672.2|  709|Caenorhabditis elegans Hypothetical
           protein R03A10.3 protein.
          Length = 709

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 24/57 (42%), Positives = 31/57 (54%)
 Frame = -2

Query: 569 VEGAEPYAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 399
           V G  P+ ED  K + I    FEV+  CTRC M  VDP TG ++ +   L  L+ YR
Sbjct: 622 VRGLPPFIEDTAKRLSIENLEFEVVDKCTRCEMICVDPMTGEKDPSL--LLALRDYR 676


>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
            Y6B3B.1 protein.
          Length = 1829

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 402  IFFQCIQWFRSRIANASFWIDCGHHASRARLYNFEHVFADLHE 530
            I  Q + W R+ +      I   ++  +AR YNF + F + H+
Sbjct: 1781 ILGQAVMWARNEVVIEEELIQILNNHGQAREYNFFYAFIEAHD 1823


>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
            protein Y6B3B.1 protein.
          Length = 1829

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 402  IFFQCIQWFRSRIANASFWIDCGHHASRARLYNFEHVFADLHE 530
            I  Q + W R+ +      I   ++  +AR YNF + F + H+
Sbjct: 1781 ILGQAVMWARNEVVIEEELIQILNNHGQAREYNFFYAFIEAHD 1823


>AF098500-1|AAC67400.2|  311|Caenorhabditis elegans Hypothetical
           protein F43B10.1 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 402 IFFQCIQWFRSRIANASFWIDCGHHASRARLYNFEHVF 515
           IFF C  +  S +   S ++  GHH  RARL  F  VF
Sbjct: 15  IFFLCSVFIFSLVLFLSLYLSHGHH--RARLIIFISVF 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,162,681
Number of Sequences: 27780
Number of extensions: 175607
Number of successful extensions: 423
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)