Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0262
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495 33 0.23
11_06_0442 - 23622633-23623000,23623149-23623721,23624795-236253... 30 1.6
11_01_0470 + 3645010-3647686,3647804-3648168 30 1.6
01_05_0110 + 18225431-18226992,18227158-18228132,18228343-182284... 30 1.6
01_01_0361 + 2838979-2841745,2841897-2842285 30 1.6
10_03_0031 + 7214010-7215450,7215534-7216913,7217007-7217386 29 2.1
03_02_0012 - 4914223-4914468,4914511-4914587,4914671-4914732,491... 29 2.1
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 29 2.1
04_04_1335 - 32730516-32730570,32730655-32731154,32731235-327314... 29 2.8
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 29 3.7
06_01_0689 + 5028932-5031013 28 4.9
06_03_0609 + 22710442-22713502,22713596-22713948 28 6.5
03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411 28 6.5
06_03_0846 - 25328224-25330613,25330716-25330794 27 8.5
05_01_0475 - 3818121-3820565 27 8.5
04_02_0008 + 8473198-8475523,8475618-8475967 27 8.5
>11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495
Length = 1086
Score = 32.7 bits (71), Expect = 0.23
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Frame = -3
Query: 557 INLLSGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNIYSHDLEASLRGKVNTLQYADD 378
I+ L+G M+ +S++ + S I + +++ ++ + L S+ L+ A+
Sbjct: 488 ISNLTGLMVLALSDNQFHSTIPESIM---EMVNLRWLDLSGNSLAGSVPSNAGMLKNAEK 544
Query: 377 LLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNN 198
L L S ++ + KL + L NN LS +VP SI L S ++L S + F +
Sbjct: 545 LFLQ-SNKLSGSIPKDMGNLTKLEHLVLSNNQLSSTVPPSIFHLSSLIQLDLSHNFFSDV 603
Query: 197 IRVPVKSEATFLGVILD-SRLTGS 129
+ V + + + L +R TGS
Sbjct: 604 LPVDIGNMKQINNIDLSTNRFTGS 627
>11_06_0442 -
23622633-23623000,23623149-23623721,23624795-23625335,
23625807-23625982,23626081-23626804
Length = 793
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 332 TVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSV 216
++T +L +WLD N L +P SI L +++P S+
Sbjct: 267 SLTNCTQLTNLWLDRNKLQGIIPSSITNLSEGLKIPTSL 305
>11_01_0470 + 3645010-3647686,3647804-3648168
Length = 1013
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 419 SLRGKV-NTLQYADDL-LLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVP 264
SL G++ ++ Y L LY+S +++ M +T L +WLD+N L +P
Sbjct: 109 SLTGEIPSSFGYLHRLQFLYLSNNTLQGMIPDLTNCSNLKAIWLDSNDLVGQIP 162
>01_05_0110 +
18225431-18226992,18227158-18228132,18228343-18228437,
18228556-18228842
Length = 972
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/108 (21%), Positives = 52/108 (48%)
Frame = -3
Query: 473 GSVLSPLLYNIYSHDLEASLRGKVNTLQYADDLLLYVSGDSIDNMSDTVTYSLKLLKVWL 294
G +++ L ++ ++ L + ++ L+ + +L + S + D + KL + +
Sbjct: 531 GKLVNLNLIDLRNNQLSGKVPNQIGQLKSLE-ILDFSSNQLSGAIPDDLGNCFKLQSLKM 589
Query: 293 DNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVIL 150
NNSL+ S+P ++ S L + + NN+ P+ SE L +++
Sbjct: 590 SNNSLNGSIPSTLGHFLS---LQSMLDLSQNNLSGPIPSELGMLEMLM 634
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = -3
Query: 443 IYSHDLEASLRGK---VNTLQYADDLL-LYVSGDSIDNM--SDTVTYSLKLLKVWLDNNS 282
+Y + LEA+ R + +L L L +S +S + V S L K++LDNNS
Sbjct: 325 LYGNRLEANNRKGWEFITSLTNCSQLQQLVISDNSFSGQLPNSVVNLSTTLHKLYLDNNS 384
Query: 281 LSLSVPKSI 255
+S S+P+ I
Sbjct: 385 ISGSIPEDI 393
>10_03_0031 + 7214010-7215450,7215534-7216913,7217007-7217386
Length = 1066
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = -3
Query: 446 NIYSHDLEAS-LRGKV--NTLQYADDLLLYVSGDSID-NMSDTVTYSLKLLKVWLDNNSL 279
N++ DL + L G + NT + ++L++ + ++ + + KL + L NN L
Sbjct: 488 NLHMLDLSGNNLAGSIPSNTAMLKNVVMLFLQNNEFSGSIIEDIGNLTKLEHLRLSNNQL 547
Query: 278 SLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPV 183
S +VP S+ L S + L S ++F + V +
Sbjct: 548 SSTVPPSLFHLDSLIELDLSRNLFSGALPVDI 579
>03_02_0012 -
4914223-4914468,4914511-4914587,4914671-4914732,
4914825-4915018,4915153-4915439,4915520-4915646,
4916216-4916446,4917210-4917384,4917461-4917668,
4917745-4917793,4918016-4918300
Length = 646
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 256 ILLGTERLRELLSSQTFSNLREYVTVSDMLSIESPET*RSKSSAYWSVLTLPLREASRS 432
I++G ++L+ LL F+N + V+V+ + + ET R +W P+ + S
Sbjct: 203 IVIGLQQLKGLLGLSHFTNRTDVVSVTKAVWVSVHETGRKYKKLFWVSAIAPVLSVALS 261
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 271 ERLRELLSSQTFSNLREYVTVSDMLSIESPET*RSKSSAYWSVLTLPLREAS 426
E LRE++S F + E V SDML ++ PE +S L+L L+ A+
Sbjct: 1277 EELREIMSQLGFRTITEMVGRSDMLEVD-PEVVKSNEKLENIDLSLILKPAA 1327
>04_04_1335 -
32730516-32730570,32730655-32731154,32731235-32731416,
32732673-32732779,32733364-32733395,32733499-32733542,
32733816-32733977,32734356-32734755
Length = 493
Score = 29.1 bits (62), Expect = 2.8
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Frame = -3
Query: 566 SFIINLLSGRMLKV--ISEDSYQSRIVWKGLPQGSVLSPLLYNIYSHDLEASLRGKVNTL 393
SF I +LSG +L + S+ + I++ + VL + Y + E GK N +
Sbjct: 126 SFHIGILSGALLVIAGFSQLCSTTPILFVDI----VLGYIFYKLSILSAELQRNGKANNI 181
Query: 392 QYADDLLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRL 228
L+L DN S Y + +W N L S+ S + MRL
Sbjct: 182 CARIQLVLIFILSFKDNSSSQGIYGILSELIWFINVQLYFSMVYSEVTGLKHMRL 236
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 188 PVKSEATFLGVILDSRLTGSPHCYYISDKCEKILN 84
P + + +GV++ + GSPH + ISD+ +++
Sbjct: 867 PTRYDMWSVGVVMLELIVGSPHVFQISDRTRALMD 901
>06_01_0689 + 5028932-5031013
Length = 693
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 311 LLKVWLDNNSLSLSVPKSIIVLFSRMRL 228
L K+WLD+N LS ++P SI S + L
Sbjct: 152 LKKLWLDHNELSGAIPASIAQATSLLEL 179
>06_03_0609 + 22710442-22713502,22713596-22713948
Length = 1137
Score = 27.9 bits (59), Expect = 6.5
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = -3
Query: 428 LEASLRGKVNTLQYADDLL-LYVSGDSID-NMSDTV-TYSLKLLKVWLDNNSLSLSVPKS 258
LEA G +++L L L + G+++ N+ +V S L ++WL NN +S +P+
Sbjct: 448 LEAGDWGFISSLSNCTRLTKLMLDGNNLQGNLPSSVGNLSSSLQRLWLRNNKISGPIPQE 507
Query: 257 IIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVI--LDSRLTG 132
I L S L + NI + + LG++ +RL+G
Sbjct: 508 IGNLKSLTELYMDYNQLTGNISLTI-GNLHKLGILSFAQNRLSG 550
>03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411
Length = 1311
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 470 SVLSPLLYNIYSHDLEASLRGKVNTLQYADDLLLYVSGDSIDNMSDTVTYSLKLLKVWLD 291
+VLSP L++I S+ + VN+LQ+ DS + S K ++VW+D
Sbjct: 816 TVLSPELHDIDSNHVGID----VNSLQFIQSHTAGYYDDSTGAFMNLTLISRKAMQVWVD 871
Query: 290 NNSLSL 273
N ++
Sbjct: 872 YNGQAM 877
>06_03_0846 - 25328224-25330613,25330716-25330794
Length = 822
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 485 GLPQGSVLSPLLYNIY 438
GLPQ VL+P+L NIY
Sbjct: 292 GLPQEGVLAPILMNIY 307
>05_01_0475 - 3818121-3820565
Length = 814
Score = 27.5 bits (58), Expect = 8.5
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 380 DLLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYN 201
DLL D IDN S+ V Y L+L + ++ + P +V S + S+ V
Sbjct: 418 DLLSVNRNDGIDNSSEDVLY-LRLAAKDVPSSRKNKIKPIVAVVAASIV----SLLVMLM 472
Query: 200 NIRVPVKSEATFLGVIL-DSRLTGSPHCYYISDKCEKILNILRCLSGVWWGA 48
I + ++ + F G L DS+ +G + +D C N L G +G+
Sbjct: 473 LILLVLRKKLRFCGAQLHDSQCSGGIVAFRYNDLCHATKNFSEKLGGGGFGS 524
>04_02_0008 + 8473198-8475523,8475618-8475967
Length = 891
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 LYNIYSHDLEASLRGKVNTLQYADDLLLYVS--GDSIDNMSDTVTYSLKLLKVWLDNNSL 279
+ ++ S+ L S+ + +L+ + LLL + G I ++ ++T +LL++ +D N+L
Sbjct: 212 MLDLSSNHLSGSVPA-LGSLRNLNKLLLGSNRLGADIWSLITSLTNCTRLLELSMDGNNL 270
Query: 278 SLSVPKSI 255
+ S+PKSI
Sbjct: 271 NGSLPKSI 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,372,568
Number of Sequences: 37544
Number of extensions: 265819
Number of successful extensions: 748
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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