Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0262
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 47 9e-06
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.5
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 61.3 bits (142), Expect = 5e-10
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = -3
Query: 563 FIINLLSGRMLKVISEDSYQSR-IVWKGLPQGSVLSPLLYNIYSHDLEASLRGKVNTLQY 387
++ LS R +V + SR G+PQG+VLSPLL+ IY +D+ + L KV Q+
Sbjct: 49 WVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQF 108
Query: 386 ADDLLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVF 207
ADD LY S ++ + + +L + W + L+L+ K++ V + R+
Sbjct: 109 ADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQSKTVHVTVGKRRI--DFKYH 165
Query: 206 YNNIRVPVKSEATFLGVILDSRLTGSPH 123
+ + K+ LG ++ +L S H
Sbjct: 166 LDGYPIERKAITRDLGFLISEKLDFSDH 193
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Frame = -3
Query: 554 NLLSGRMLKVISEDSYQSR--IVWKGLPQGSVLSPLLYNIYSHDLEASLRGKVNTLQYAD 381
N L R+++ S D++ S+ + G+PQGSV+SP L+ Y D+ + + YAD
Sbjct: 508 NYLHKRLIRT-SHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPT--QQDTMLISYAD 564
Query: 380 DLLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFS--RMRLPPSVSVF 207
D+ + I+ ++ V + + +L +S+S KS + +FS ++
Sbjct: 565 DMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFSCDPKEHKTKPDIY 624
Query: 206 YNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWG 51
+ + +PV + LG+ L++ H + +++ ++G WG
Sbjct: 625 WMDDPIPVINAPKLLGITLNTMTGTKDHVGNAIKSMQNKTRVIKSMAGTSWG 676
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 52.0 bits (119), Expect = 3e-07
Identities = 39/146 (26%), Positives = 71/146 (48%)
Frame = -3
Query: 545 SGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNIYSHDLEASLRGKVNTLQYADDLLLY 366
S ++ K +S++SY + G+PQGSV PLL+ ++ ++L L +N +ADD+ ++
Sbjct: 863 SVKINKFVSKNSYP---ISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIF 919
Query: 365 VSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVP 186
+ +I + S+ ++ W N L L+ KS ++ S SV + + +
Sbjct: 920 HTDPTI------IQNSIDIIVSWSKLNELPLAPTKSALLALGTRNKNQSYSV--DGVPIT 971
Query: 185 VKSEATFLGVILDSRLTGSPHCYYIS 108
S LG+I D +L H +S
Sbjct: 972 PSSTVRDLGLITDCKLKFEHHIVKVS 997
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 47.2 bits (107), Expect = 9e-06
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = -3
Query: 593 NLNIPQIFISFIINLLSGRMLKVISEDSYQSRI--VWKGLPQGSVLSPLLYNIYSHDLEA 420
+ I +F ++ + LS R V + I + G+P+GSV P L+ I+ + L
Sbjct: 18 DFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLLL 77
Query: 419 SLRGKVNTLQYADDLLLYVSGDSIDNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIV 249
S+ ++ +ADDL +Y + + ++ L+ W +NN L L+V K+ ++
Sbjct: 78 SVPPSISCSAFADDLKVY------SHSPPLIQTTIDLITTWSENNKLPLAVHKAALL 128
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -3
Query: 203 NNIRVPVKSEATFLGVILDSRLTGSPHCYYISD----KCEKILNILRCL 69
NN+ + + A LG++ DS+LT PH I +C+++L + L
Sbjct: 185 NNLPISPSNIARDLGILTDSKLTFKPHIKKIVSLALLRCKQLLKSFKSL 233
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -3
Query: 212 VFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWW 54
+F ++PV +A +GV+L+ R+ GS +++ +K N ++ LS + W
Sbjct: 417 IFREVRQLPVNYQARTIGVVLNERIAGSVE-KFVNSITKKSFNSVKQLSKLAW 468
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -3
Query: 212 VFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWW 54
+F ++PV +A +GV+L+ R+ GS +++ +K N ++ LS + W
Sbjct: 414 IFREVRQLPVNYQARTIGVVLNERIAGSVE-KFVNSITKKSFNSVKQLSKLAW 465
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -3
Query: 212 VFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWW 54
+F ++PV +A +GV+L+ R+ GS +++ +K N ++ LS + W
Sbjct: 417 IFREVRQLPVNYQARTIGVVLNERIAGSVE-KFVNSITKKSFNSVKQLSKLAW 468
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -3
Query: 212 VFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWW 54
+F ++PV +A +GV+L+ R+ GS +++ +K N ++ LS + W
Sbjct: 414 IFREVRQLPVNYQARTIGVVLNERIAGSVE-KFVNSITKKSFNSVKQLSKLAW 465
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 407 KVNTLQYADDLLLYVSGDSIDNMSDTVTYSLKLLKVWL 294
++ L D+++Y+ S+++ D YS+K LK W+
Sbjct: 167 ELTKLTNPSDVMVYMQNKSLEDKLDPAEYSIKDLKKWI 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,700,839
Number of Sequences: 27780
Number of extensions: 243307
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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