Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0261
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.39 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.39 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   2.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 268 HLIYESHGFEF 300
           HLIYE+HGF +
Sbjct: 142 HLIYEAHGFSY 152


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 268 HLIYESHGFEF 300
           HLIYE+HGF +
Sbjct: 138 HLIYEAHGFSY 148


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 286 HGFEFATDHVFLIIIIINGFCLFAHI 363
           +GF      +FL+I ++N +C    I
Sbjct: 115 YGFVIVAHLLFLVIFVLNIWCWIVEI 140


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -3

Query: 147 KQIRHLVNCYNCTYPINP*FVYSY 76
           +++ HL+  Y C + + P   + Y
Sbjct: 271 RKLIHLLQEYRCIFSLRPGLTHKY 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,312
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)