Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0261
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase pro...    30   0.84 
AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kin...    30   0.84 
Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z99710-12|CAI79158.1|  333|Caenorhabditis elegans Hypothetical p...    27   5.9  
AL034393-28|CAI79175.1|  333|Caenorhabditis elegans Hypothetical...    27   5.9  

>U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase
           protein 3 protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 0.84
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 387 QVNSNVDFNMSKQTKTINDYDY*ENMICCKLKTVTFINQ 271
           +  S V F++S  T  IN  D+ + ++C  LK+VTFI +
Sbjct: 506 ETKSAVIFHLSNGTVQINFLDHVKMVLCPLLKSVTFIEE 544


>AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kinase
           protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 0.84
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 387 QVNSNVDFNMSKQTKTINDYDY*ENMICCKLKTVTFINQ 271
           +  S V F++S  T  IN  D+ + ++C  LK+VTFI +
Sbjct: 506 ETKSAVIFHLSNGTVQINFLDHVKMVLCPLLKSVTFIEE 544


>Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical
           protein R07A4.2 protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 265 QHLIYESHGFEFATDHVFLIIIIINGFCLFAHIKI 369
           QH +Y    + F +  VF +I+  NGFCLF  + +
Sbjct: 43  QHFLYCGERY-FTSSQVFQLIVF-NGFCLFLTLSL 75


>Z99710-12|CAI79158.1|  333|Caenorhabditis elegans Hypothetical
           protein Y18D10A.22 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 264 PCIKHYATLLHNKIILYYSH 205
           PCI+ Y  LLH+++  ++ H
Sbjct: 105 PCIQAYCQLLHDRVTFHHKH 124


>AL034393-28|CAI79175.1|  333|Caenorhabditis elegans Hypothetical
           protein Y18D10A.22 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 264 PCIKHYATLLHNKIILYYSH 205
           PCI+ Y  LLH+++  ++ H
Sbjct: 105 PCIQAYCQLLHDRVTFHHKH 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,128,457
Number of Sequences: 27780
Number of extensions: 211456
Number of successful extensions: 301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)