Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0261
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    27   0.15 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   3.2  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 294 KTVTFINQMLPCIKHYATLLHNKIILYYSHI 202
           K VTF    +P   HY  L H+K +LY S +
Sbjct: 98  KKVTFHEMSIP--NHYLWLYHDKTLLYMSKL 126


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 117  NCTYPINP*FVYSYVLIKTQC 55
            NC +     FV SY LI  QC
Sbjct: 1614 NCLFRKPEHFVASYALISNQC 1634


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = -1

Query: 506 YVH--NVHAILSHRTILCDQ 453
           +VH  N HAIL H   LC++
Sbjct: 280 HVHHANHHAILGHSGFLCER 299


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 457 SHKMVRCDNIACTLC 501
           S+ MVRCD+I  TLC
Sbjct: 15  SYMMVRCDDI--TLC 27


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 503  VHNVHAILSHRTILCDQFLFVKNN 432
            +HN++A+ + +   CD  L V ++
Sbjct: 1473 LHNLYAVPTDKKSACDSKLIVDHS 1496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,542
Number of Sequences: 438
Number of extensions: 2838
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)