Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0257
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384...    30   1.8  
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565...    29   4.1  
10_07_0098 - 12844631-12845074,12845329-12846570                       28   5.4  
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711...    28   7.2  

>03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476,
            10839965-10841686,10841776-10842173,10842264-10842318,
            10842989-10843048,10843444-10843540,10844885-10844955,
            10845029-10845109,10846054-10846124,10847951-10848119,
            10848521-10848683,10848752-10848942,10849037-10849168
          Length = 1381

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 417  EHSLLQDWLLKAKCKLTWKHELVEG 491
            E S+ ++W  + KCK+ W++EL EG
Sbjct: 1156 EASIDRNWTNRDKCKVWWRNELEEG 1180


>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
            27456774-27456872,27456948-27457012,27457476-27457575,
            27458326-27458408,27458494-27458569,27458920-27459698
          Length = 1515

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 634  FLAYSVNNFFTG-FICMLIMQLSVW*YVFKLFKSKPIFLIKLFILQINNPSTNSCF-QVS 461
            F  Y V  FF+  FICM++     +     +  S P+F+++L      +  TN CF +  
Sbjct: 1129 FSVYMVTEFFSCIFICMIVAAYCPFITDVPVISS-PMFIVRLNFKVAEDNMTNICFRKEG 1187

Query: 460  LHFA 449
            LH++
Sbjct: 1188 LHWS 1191


>10_07_0098 - 12844631-12845074,12845329-12846570
          Length = 561

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 321 GDLISLMFLL--YDDPDIALVKLTAYQQSSNAYHEHSLLQDWLL 446
           GD     FLL     P ++L+K T  +   N YH++ ++QD L+
Sbjct: 354 GDQFWFRFLLGWLMPPKVSLLKATQGESIRNYYHDNHVIQDMLV 397


>06_01_0922 -
           7113781-7113942,7114093-7114235,7115305-7115506,
           7115590-7115685,7117053-7117139,7117237-7117638
          Length = 363

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 LNKKMQSSSPGPVIDLRADVNRLVLHSNLI-NLEVIIDIEHELRKES 320
           L  KM+ SS  P++DL+ +  R +     I  +E+I+ +E + R  S
Sbjct: 179 LAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRS 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,271
Number of Sequences: 37544
Number of extensions: 299656
Number of successful extensions: 715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)