Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0257
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    25   0.62 
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    24   1.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   5.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.6  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 501 KLTILRPIHVSRSAYILPLKANLEARNAHDMH 406
           ++  + PI+V   AYI  +K+N+      D+H
Sbjct: 32  EINSINPINVYTKAYIYTIKSNMAKTLQFDVH 63


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 560 LPNRQLHNEHTYKSCKKVIY 619
           L N+ +HN + YK+  K +Y
Sbjct: 318 LSNKTIHNNNNYKNYNKKLY 337


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 216 PVIDLRADVNRLVLHSNLINLEVIID 293
           PV    AD +RLV  +  + L+VI+D
Sbjct: 94  PVYGTLADFDRLVRRAKSLGLKVILD 119


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 282 VIIDIEHELRKESGDLISLMFLLYDDPDIALVKLTAYQQ 398
           V+I   + L    G +I    L Y D    +V +  YQQ
Sbjct: 641 VVISSSNPLNVPYGPVIPEQSLTYQDQQYQVVSVEQYQQ 679


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
 Frame = +2

Query: 560 LPNRQLHNEHTYK----------SCKKVIYRI 625
           L NR +HN + YK          +CKK+ Y I
Sbjct: 85  LSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 413 ICITRLLISCQFY*CNVWIIVQ 348
           +CI   LI+ Q     VW+I++
Sbjct: 628 VCIAAALIALQIVLTLVWMIIE 649


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 122 GFGFIKYLSSDNFFQ 166
           GF  I Y +SDN FQ
Sbjct: 208 GFALIIYNNSDNSFQ 222


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 413 ICITRLLISCQFY*CNVWIIVQ 348
           +CI   LI+ Q     VW+I++
Sbjct: 718 VCIAAALIALQIVLTLVWMIIE 739


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/24 (33%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -3

Query: 102 ICNATTFQLKICMINYYQTT-PVI 34
           +C+A+  +L + ++N++  T PVI
Sbjct: 29  VCSASNGELFLALLNFFVATSPVI 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,740
Number of Sequences: 438
Number of extensions: 3957
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)