Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0256
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...   115   3e-26
Z37092-2|CAA85453.1|  555|Caenorhabditis elegans Hypothetical pr...    32   0.26 
U40939-4|AAA81702.1|  416|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AL032630-6|CAA21562.1|  181|Caenorhabditis elegans Hypothetical ...    27   7.4  

>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score =  115 bits (276), Expect = 3e-26
 Identities = 53/126 (42%), Positives = 85/126 (67%)
 Frame = +2

Query: 194 GFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMRKYLDQPIFSRIKYEHPEYFKKI 373
           GFLGK  VEKL ++   I +IY++IR +KG N +ER+   L  P+F+RI+ E PE F K+
Sbjct: 21  GFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDPLFNRIRQEKPEAFDKL 80

Query: 374 IPISGDITAPKLGLCDEERNILINEVSIVIHSAASVKLNDHLKFTLNTNVGGTMKVLELV 553
             I GD+    LG+  E+  ++ + V++VIHSAA+VK ++HL+  +  NV GT ++++L 
Sbjct: 81  KAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTMNVIGTKRIIDLC 140

Query: 554 KEMKNL 571
            ++K+L
Sbjct: 141 HQIKDL 146


>Z37092-2|CAA85453.1|  555|Caenorhabditis elegans Hypothetical
           protein F44F4.2 protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 473 RLSESLSTPR*LIYFFLHRTILVWVR*YHQRW 378
           RL   LS    L+Y F++R IL W+  Y  +W
Sbjct: 491 RLQRRLSVSSVLLYLFIYRVILRWIEPYVNKW 522


>U40939-4|AAA81702.1|  416|Caenorhabditis elegans Hypothetical
           protein F13D11.1 protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = +2

Query: 272 DKKGSNTEERMRKYLDQPIFSRIKYEHPEYFKKIIPISGDITAPKLGLCDEERNILINEV 451
           +K  +   + +R + D+PI   +KY H     K+  I  D   P         N ++N +
Sbjct: 168 EKYDAELLQLVRNHADEPIVEAVKYNHVIDSLKVRYILQDDRLPYPEWARGYENRILN-M 226

Query: 452 SIVIHSAASVKLND 493
           S +IH A     ND
Sbjct: 227 SFLIHDAVVKVQND 240


>Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.6 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 134 LSDREGILRW*IRFYYRERPGFLGKAYVEKLAYSC 238
           L+D EG+LRW  R   R   GF G+    KL   C
Sbjct: 255 LADMEGLLRWATRRQMRFEGGFQGR--TNKLVDGC 287


>AL032630-6|CAA21562.1|  181|Caenorhabditis elegans Hypothetical
           protein Y62H9A.6 protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 203 GKAYVEKLAYSCPGIVSIYILIRDKKGSNTEE 298
           GK Y      SCP     Y +I DK GSN  +
Sbjct: 98  GKTYT---TISCPSNTKTYAIIADKSGSNVSQ 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,179,462
Number of Sequences: 27780
Number of extensions: 275445
Number of successful extensions: 723
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)