Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0255
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    50   5e-05
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    45   0.001
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.0  

>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 49.6 bits (113), Expect = 5e-05
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = -1

Query: 126 LKLENGWTDLANFGLELFVEVQRRFK 49
           LKLENGWTDLANFGLEL VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -1

Query: 426 FLLFRWVVELTAHLVLSAYWSP 361
           FLL RWV ELTAHLVLS YWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 34.3 bits (75), Expect = 1.8
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 364 PMDIYNVNAPPTSRYKF 314
           P  +Y+VNAPPTSRYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.0
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -3

Query: 238 AGWRYLPVRTHKRSYYQY 185
           A W YLP RTHKRSY++Y
Sbjct: 569 AEWWYLPARTHKRSYHRY 586


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,639,006
Number of Sequences: 1657284
Number of extensions: 9517914
Number of successful extensions: 17601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17599
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)