Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0251
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 36 0.004
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 0.48
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 1.1
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 27 1.5
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 27 1.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 2.6
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 26 3.4
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 3.4
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 3.4
SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual 25 4.5
SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces pom... 25 4.5
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 25 4.5
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 25 4.5
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 25 7.8
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 25 7.8
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 25 7.8
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 25 7.8
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 25 7.8
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 35.5 bits (78), Expect = 0.004
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 182 ARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEP 319
A F +E G YR R IN N ++ ++ HN+T+I DG EP
Sbjct: 203 ATFAMEPGKTYRLRFINIGAFN-NYDVMIEDHNMTIIEVDGEYTEP 247
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 28.7 bits (61), Expect = 0.48
Identities = 22/52 (42%), Positives = 24/52 (46%)
Frame = -3
Query: 410 SSHVGSPAGSTSMAPS*CKTPTCLALVNRR*APNRIHHSR*QLCCVRPQTTL 255
S VGS AG TS S TP A + RR NR HH + RPQ L
Sbjct: 641 SDVVGSDAGDTSKVSSGTSTPRMAAPIARR--SNR-HHPYSRPSSTRPQCQL 689
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 428 NPSLCSSSHVGSPAGSTSMAPS 363
NPSL SSS+ S GS + APS
Sbjct: 134 NPSLFSSSNAASQRGSLNTAPS 155
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 471 SLVFFFTFVQRVQLQSFIMQLLPCWVTSRFDFHGSFVMQNS 349
S+V+F TF++ Q +L + FHGSF+ S
Sbjct: 142 SIVYFQTFLEGYQPFPLFSELADNLIMPSTQFHGSFIYNQS 182
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 287 VISSDGYDLEPIVDSLKLNKSEFCITKEPWKS 382
V++ D + L P+ ++ K +S+FC + WKS
Sbjct: 450 VLTGDFFQLPPVPENGK--ESKFCFESQTWKS 479
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 121 RSRKVQGLQQRHREAFIYESGEVQCRTGT*IPVSR 225
R+ V+ +R R A+ +SGEV+C T P+++
Sbjct: 1101 RNGNVKEEARRTRNAYTQKSGEVECFMETCTPIAK 1135
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 25.8 bits (54), Expect = 3.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 ALITRNRYLCPCSTLNLAAFIYKGFSVSLLKTLNLPTPLMRRV 106
+L+ +N Y S L AA I + LL L LP L RR+
Sbjct: 153 SLLLKNNYYGSISILVFAAAIVRSEIALLLMCLILPLLLQRRI 195
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 325 RFTKAKQVGVLHYEGAMEVEPAGDPTWEELHNEGLQLNALNKGEEEDETI 474
R K++G L + ++ E T+ LHN L L EE+DE +
Sbjct: 601 RLLLKKEIGQLESDDYIQFEKEFLETYSALHNTSSLLPGLVIYEEDDEDV 650
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 3.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -2
Query: 405 PCWVTSRFDFHGSFVMQNSDLFSFSESTIGSKSYPSLEITVMLCPSTDNSIGQFRNSALI 226
P + SR + SF M+ S S+ + S+PS + + ST + + +FRN L+
Sbjct: 513 PSPIKSRNNNQMSFAMEEEADVSQPSSSSFTLSFPSALTSSKVSSSTSHLLTRFRNVTLL 572
>SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 435 QLQSFIMQLLPCWVTSRFDFHGSFVMQNSDLFSFSESTIGSKSYPSLEITVM 280
Q QSF+ +L W + + S++ + FSF+ I S +P I+++
Sbjct: 69 QTQSFLKTVLIVWFSLLVTSYFSYMPFAASYFSFTMLYIWSWKHPLYRISIL 120
>SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 102 GLLSPEEWLV--VRKHPN*ELVDPIRYYHPRAE 10
G SP WLV ++KHP+ LV+P R H E
Sbjct: 134 GRFSP--WLVAELQKHPDIALVEPDRVMHVMTE 164
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 4.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 242 LNCPIELSVDGHNITVISSDGY 307
LNC + S+ GH V+S DGY
Sbjct: 423 LNCSLIKSMVGHEEKVMSVDGY 444
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 4.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 421 HYAAPPMLGHQPVRLP 374
HYA P GH P+RLP
Sbjct: 330 HYAKIPDAGHIPLRLP 345
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 24.6 bits (51), Expect = 7.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 266 VDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
+D ++ +S+ +D P+V ++K+NK F
Sbjct: 916 IDDNSYVRVSTSTFDKVPVVLTIKMNKHYF 945
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 452 PLFSAFNCNPSLCSSSHVGSPAGSTSMAPS*CKTPTCLALVNRR*APNRI 303
P +S N N S+ V SPA + S +P P +A+ + +PN++
Sbjct: 91 PAYSVINGNNSV----QVASPAYTVSHSPHSFSNPRYVAVPQKSTSPNQV 136
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 24.6 bits (51), Expect = 7.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 448 CSARSIAILHYAAPPMLGHQPVR 380
C LHY AP ++ H+P R
Sbjct: 159 CLENYCGSLHYLAPEIVSHKPYR 181
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITV 289
+AA + + + V NA +N P EL+ DG+ + +
Sbjct: 110 QAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 296 SDGYDLEPIVDSLKLNKS 349
SDGYDL+P L+L +S
Sbjct: 302 SDGYDLQPTKSQLELYQS 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,052,426
Number of Sequences: 5004
Number of extensions: 41746
Number of successful extensions: 182
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -