Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0251
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U90278-1|AAB49993.1| 1484|Homo sapiens N-methyl-D-aspartate rece...    30   3.7  
U88963-1|AAD00659.1| 1484|Homo sapiens N-methyl-D-aspartate rece...    30   3.7  
U11287-1|AAB60368.1| 1484|Homo sapiens N-methyl-D-aspartate rece...    30   3.7  
BC113620-1|AAI13621.1| 1484|Homo sapiens glutamate receptor, ion...    30   3.7  
BC113618-1|AAI13619.1| 1484|Homo sapiens glutamate receptor, ion...    30   3.7  
BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated prot...    29   8.5  
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     29   8.5  
BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated prot...    29   8.5  
BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated prot...    29   8.5  
BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated prot...    29   8.5  
AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated prot...    29   8.5  
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    29   8.5  

>U90278-1|AAB49993.1| 1484|Homo sapiens N-methyl-D-aspartate
           receptor 2B subunit precursor protein.
          Length = 1484

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
           K++ +N  +   Y+  ++N   +N   E    G N++  S DGY + P +  + LNK   
Sbjct: 318 KSSCYNTHEKRIYQSNMLNRYLINVTFE----GRNLS-FSEDGYQMHPKLVIILLNKERK 372

Query: 356 CITKEPWKSNRL 391
                 WK   L
Sbjct: 373 WERVGKWKDKSL 384


>U88963-1|AAD00659.1| 1484|Homo sapiens N-methyl-D-aspartate
           receptor subunit 2B protein.
          Length = 1484

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
           K++ +N  +   Y+  ++N   +N   E    G N++  S DGY + P +  + LNK   
Sbjct: 318 KSSCYNTHEKRIYQSNMLNRYLINVTFE----GRNLS-FSEDGYQMHPKLVIILLNKERK 372

Query: 356 CITKEPWKSNRL 391
                 WK   L
Sbjct: 373 WERVGKWKDKSL 384


>U11287-1|AAB60368.1| 1484|Homo sapiens N-methyl-D-aspartate
           receptor subunit NR3 protein.
          Length = 1484

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
           K++ +N  +   Y+  ++N   +N   E    G N++  S DGY + P +  + LNK   
Sbjct: 318 KSSCYNTHEKRIYQSNMLNRYLINVTFE----GRNLS-FSEDGYQMHPKLVIILLNKERK 372

Query: 356 CITKEPWKSNRL 391
                 WK   L
Sbjct: 373 WERVGKWKDKSL 384


>BC113620-1|AAI13621.1| 1484|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-aspartate 2B protein.
          Length = 1484

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
           K++ +N  +   Y+  ++N   +N   E    G N++  S DGY + P +  + LNK   
Sbjct: 318 KSSCYNTHEKRIYQSNMLNRYLINVTFE----GRNLS-FSEDGYQMHPKLVIILLNKERK 372

Query: 356 CITKEPWKSNRL 391
                 WK   L
Sbjct: 373 WERVGKWKDKSL 384


>BC113618-1|AAI13619.1| 1484|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-aspartate 2B protein.
          Length = 1484

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 176 KAARFNVEQGHRYRFRVINAEFLNCPIELSVDGHNITVISSDGYDLEPIVDSLKLNKSEF 355
           K++ +N  +   Y+  ++N   +N   E    G N++  S DGY + P +  + LNK   
Sbjct: 318 KSSCYNTHEKRIYQSNMLNRYLINVTFE----GRNLS-FSEDGYQMHPKLVIILLNKERK 372

Query: 356 CITKEPWKSNRL 391
                 WK   L
Sbjct: 373 WERVGKWKDKSL 384


>BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 35  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 65


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 45  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 75


>BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 35  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 65


>BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 35  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 65


>BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 35  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 65


>AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated protein
           1.3 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 35  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 65


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 431 CNPSLCSSSHVGSPAGSTS-MAPS*CKTPTC 342
           C PS C +S  G P+ STS    S C  P+C
Sbjct: 45  CQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,802,611
Number of Sequences: 237096
Number of extensions: 1588120
Number of successful extensions: 4646
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4645
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)