Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0251
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.9  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.9  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   6.9  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.1  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 424 LHYAAPPMLGHQPVRLPWL 368
           LHY   P + + P R  WL
Sbjct: 713 LHYETDPCVRYYPRRKEWL 731


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 131 RFRVFNNDTEKPLYMKAARFNVEQ 202
           ++   NN+  K LY K    N+EQ
Sbjct: 103 KYNYNNNNYNKKLYYKNYIINIEQ 126


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 474 YSLVFFFTFVQRVQLQSFIMQLLPCWVTS 388
           Y L +F   V+      ++ ++LP W++S
Sbjct: 219 YKLDYFMEDVELNAYYYYMREMLPYWMSS 247


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 474 YSLVFFFTFVQRVQLQSFIMQLLPCWVTS 388
           Y L +F   V+      ++ ++LP W++S
Sbjct: 219 YKLDYFMEDVELNAYYYYMREMLPYWMSS 247


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 323 VDSLKLNKSEFCITKEPWK 379
           +D   LN+ ++ I  E W+
Sbjct: 5   IDGFVLNRIQYAILNEAWR 23


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 270 STDNSIGQFRNSALITRNRYLCP 202
           S  N +G+F+++    R   +CP
Sbjct: 44  SGPNELGRFKHTDACCRTHDMCP 66


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 270 STDNSIGQFRNSALITRNRYLCP 202
           S  N +G+F+++    R   +CP
Sbjct: 49  SGPNELGRFKHTDACCRTHDMCP 71


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 270 STDNSIGQFRNSALITRNRYLCP 202
           S  N +G+F+++    R   +CP
Sbjct: 49  SGPNELGRFKHTDACCRTHDMCP 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,430
Number of Sequences: 438
Number of extensions: 2996
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)