Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0250
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 143 2e-35
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 92 4e-20
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 73 3e-14
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 72 7e-14
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 72 7e-14
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 56 3e-09
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 55 8e-09
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 55 8e-09
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 53 3e-08
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 50 2e-07
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 48 1e-06
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 46 3e-06
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 44 1e-05
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 42 5e-05
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 41 1e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 40 3e-04
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 38 0.001
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 37 0.002
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 37 0.002
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 36 0.004
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 29 0.35
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.9
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 2.5
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 3.2
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 3.2
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 4.3
SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|... 25 9.9
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 25 9.9
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 9.9
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 143 bits (346), Expect = 2e-35
Identities = 71/157 (45%), Positives = 91/157 (57%)
Frame = +3
Query: 75 ESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLYXXXXXXXXXXX 254
++E+K+ Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR YD +
Sbjct: 19 QAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGAD 78
Query: 255 XXFPADEIXXXXXXXXXXXXXSRGCGQGLGPVRGEDTMHPLAVTLEDLYAGKTTKLQLSK 434
AD++ G G GP +G+D +H + VTLEDLY GKTTKL L K
Sbjct: 79 GGMSADDLFASFFGGGMF-----GGGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQK 133
Query: 435 NVICAHCKGVGGKPGSLISCKDCRGQGIKVSYQQIAP 545
VIC C G GGK GS+ SC C G G+K + + P
Sbjct: 134 KVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP 170
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 92.3 bits (219), Expect = 4e-20
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQVYDLYXXXXXXXX 245
EIK++Y +LA HPDK P A ++F+ + AY++L DP+ R++YD+Y
Sbjct: 21 EIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYDMYGMNSDSNS 80
Query: 246 XXXXXFPADEIXXXXXXXXXXXXXSRGCGQGLG---PVRGEDTMHPLAVTLEDLYAGKTT 416
D++ + G G+ + RG D +H ++LED++ GK
Sbjct: 81 QFDGGVNLDDVLAQMFGMNFE---AGGPGKNVPRDRKRRGSDVIHDYEISLEDMFKGKEV 137
Query: 417 KLQLSKNVICAHCKGVGGKP-GSLISCKDCRGQGIKVSYQQIAPH 548
KL+ ++N +C C+G GGK C C G+G+K + + PH
Sbjct: 138 KLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGPH 182
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 429 SKNVICAHCKGVGGKPGSLISCKDCRGQG 515
+ VIC C G G CK C+G G
Sbjct: 186 NSQVICDTCNGKGVSFRGKDRCKHCKGSG 214
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 72.9 bits (171), Expect = 3e-14
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3
Query: 75 ESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 221
E+E+K+ Y KLA ++HPDKNP KFKEIS AYEVLSDP++R++YD Y
Sbjct: 19 EAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQY 67
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 71.7 bits (168), Expect = 7e-14
Identities = 53/175 (30%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Frame = +3
Query: 63 KMPGESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYDLY---- 221
K ESEI++ Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R++YD Y
Sbjct: 16 KDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAYGEEG 75
Query: 222 --XXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXSRGCGQGLGPVRGEDTMHPLAVTLED 395
FP G + RG + + L
Sbjct: 76 LNGQPGGPGGGPGEGFPGGGFGFDPFGDIFDNIFG-GRRRQNAVRRGPSMEQIVQIHLSS 134
Query: 396 LYAGKTTKLQLSKNVICAHCKGVGGKP-----GSLISCKDCRGQGIKVSYQQIAP 545
Y G + L++ C+ C G G P ++ SC C G G +V IAP
Sbjct: 135 FYTGGSFTLEIPVKRTCSVCSGQGFNPKYSADKAIESCPVCGGSGFRVIEHMIAP 189
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 71.7 bits (168), Expect = 7e-14
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 WLITNYTRFWAFLKMPGESEIKRNYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPK 197
W +T+ + K SEIK Y+KLAK++HPD NP AA DKF EI AYEVL DPK
Sbjct: 82 WEMTDPYKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPK 141
Query: 198 KRQVYDLY 221
K++ +D Y
Sbjct: 142 KKKAFDTY 149
Score = 34.7 bits (76), Expect = 0.009
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 GEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLIS-CKDCRGQGIKVSY 530
GED + + + G L S + C+ C G G +PGS S C C+G G ++ +
Sbjct: 210 GEDIEASITIDFMEAVRGAKKDLSYSVSSTCSSCHGSGLQPGSHKSTCFACKGTGQRLHF 269
Query: 531 QQIAPHM 551
+ HM
Sbjct: 270 IPPSFHM 276
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 56.4 bits (130), Expect = 3e-09
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +3
Query: 75 ESEIKRNYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQVYD 215
++EIK++Y KLA + HPDKN P+A + FK +S A++VLSDP R YD
Sbjct: 126 DTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYD 174
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 54.8 bits (126), Expect = 8e-09
Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 5/50 (10%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQVYD 215
+IK +Y++L++ FHPD++ A A +KF+ I +AYEVLSDP K+++YD
Sbjct: 23 QIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKEIYD 72
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPKKRQVYDLY 221
+IK+ Y KLA ++HPDKNP A +KF++IS AY+VL D K R YD +
Sbjct: 23 DIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQF 73
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 52.8 bits (121), Expect = 3e-08
Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
Frame = +3
Query: 84 IKRNYHKLAKEFHPDKN----PAAGDKFKEISYAYEVLSDPKKRQVYD 215
IK++Y +LA +HPDKN AA +KF++++ AY+VLSDPK R+ YD
Sbjct: 25 IKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYD 72
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 50.4 bits (115), Expect = 2e-07
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYD 215
EIK+ Y KLA +HPDKN A +FKE+ AY +LSDP+ R+ +D
Sbjct: 364 EIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFD 411
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 47.6 bits (108), Expect = 1e-06
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQVYD 215
EIK NY KLA ++HPD+NP D F +I+ AY +LS+ KR+ ++
Sbjct: 24 EIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWHE 71
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 46.4 bits (105), Expect = 3e-06
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Frame = +3
Query: 48 FWAFLKMPGES---EIKRNYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQ 206
++A LK+ + +I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 207 VYD 215
+YD
Sbjct: 73 IYD 75
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 44.4 bits (100), Expect = 1e-05
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQVYD 215
EI++ Y KL +HPD+NP +F+ I A+EVL DPK R+++D
Sbjct: 27 EIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRELFD 75
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 42.3 bits (95), Expect = 5e-05
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 75 ESEIKRNYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQVYD 215
+ EI R + K + ++HPDKN P A +KF + AY L D + R+ YD
Sbjct: 22 DQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 21 KWLITNYTRFWAFLKMPGESEIK---RNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSD 191
K ++ N F+ L++P ++ IK R Y K + +HPDKNP + + + + +L +
Sbjct: 32 KSILKNKATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRN 91
Query: 192 PKKRQVYDLY 221
+ R+ YD +
Sbjct: 92 TETRKRYDYF 101
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 39.5 bits (88), Expect = 3e-04
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPKKRQVYD 215
+IK+ + K + HPDK A+G+ FK I AYE+LSDP +R+ +D
Sbjct: 115 QIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPVRRRQFD 164
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 75 ESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVYDL 218
+ EIK Y K FHPDK P+ ++ AY+VLS K RQ Y +
Sbjct: 17 DDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQYQI 67
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +3
Query: 84 IKRNYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKRQVYD 215
I+R Y K A + HPD K A +F +++ AY VLSD K+R+ YD
Sbjct: 47 IRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRRKHYD 96
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDK-NPA----AGDKFKEISYAYEVLSDPKKRQVYD 215
EIK Y K A E HPD+ +P+ A ++F+ ++ AY VLSD +R YD
Sbjct: 19 EIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRAQYD 68
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 35.9 bits (79), Expect = 0.004
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Frame = +3
Query: 81 EIKRNYHKLAKEFHPDK-----NPAAGDKFK---EISYAYEVLSDPKKRQVYDLY 221
+++R+Y +L+ +FHPDK N + K EI+ AY L+D K R+ Y LY
Sbjct: 113 DVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTRENYALY 167
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 29.5 bits (63), Expect = 0.35
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 66 MPGES--EIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVYD 215
+PG S +I+ Y K + HPDK NP A D F + A L + K R+ D
Sbjct: 39 LPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESLD 93
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 78 SEIKRNYHKLAKEFHPDK 131
++IKR Y +L K+ HPDK
Sbjct: 46 NDIKRKYIELVKKHHPDK 63
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 215 VIHLSFLRIG*HFICV--TYFFKFITSCRIFVRVELFSKFVVISF-NFGFAWHF 63
++ L F G FI V T+FF+ T+C + + + + S + FAW+F
Sbjct: 1996 ILSLPFFFFGISFILVAITHFFQKTTACSVIQHIAAYVYAISSSTGSLYFAWNF 2049
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 57 FLKMPGESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 209
F K P + + RN H +K HP+ + + + + S LS PK+R V
Sbjct: 599 FNKFP--NSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVV 647
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -1
Query: 161 FFKFITSCRIFVRV---ELFSKFVVISF 87
FFKF+ +C IF + EL SKF + S+
Sbjct: 100 FFKFLKTCAIFYQTCISELISKFQLDSY 127
>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 25.8 bits (54), Expect = 4.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 164 YFFKFITSCRIFVRVELFSKFVVISFNFGFAWHF*KRPKSRIICYQPFFPLV 9
+FF ++C +FV L + +VIS F F P I+C+ FF L+
Sbjct: 2 FFFLVFSACEVFVGFSLCT--LVISVPFFFLQ---MTPFYSILCFLSFFALL 48
>SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|chr
1|||Manual
Length = 863
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 359 FATDWTKALTTSSTPTHSKEVTKEITK 279
FA DW AL S S + TK++ +
Sbjct: 825 FAADWVAALLNSGKTKISSQQTKDLAR 851
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 84 IKRNYHKLAKEFHPDKNPAAG 146
+K N+ LA +FHP+K+ +AG
Sbjct: 179 VKNNF--LATQFHPEKSGSAG 197
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 9.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 300 GYQRNYQKFHQPET 259
G++ N +FHQPET
Sbjct: 203 GFESNSDEFHQPET 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,415,713
Number of Sequences: 5004
Number of extensions: 50851
Number of successful extensions: 181
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -