SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0249
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    28   0.076
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.18 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 0.076
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +3

Query: 186 IKPKYKFVNVYTEFHEFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLG 365
           + P + F N+  EF +   +E K+         E    ++D+         L   +T +G
Sbjct: 130 LTPAFHF-NILQEFIQIFNEETKRLVEDLEA--ESHKPYIDVVVPITQFTLLSIGETAMG 186

Query: 366 LKAMISEVDEDGDNKISFR-EFLLIYRKAR 452
           +K   S+ D+DG  +  ++   LL YR  R
Sbjct: 187 IKLNASDNDKDGYKRAVYKIGQLLTYRAPR 216


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +3

Query: 186 IKPKYKFVNVYTEFHEFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLG 365
           + P + F N+  EF +   +E K+         E    ++D+         L   +T +G
Sbjct: 130 LTPAFHF-NILQEFIQIFNEETKRLVEDLEA--ECHKPYIDVVVPITQFTLLSIGETAMG 186

Query: 366 LKAMISEVDEDGDNKISFR-EFLLIYRKAR 452
           +K   S+ D+DG  +  ++   LL YR  R
Sbjct: 187 IKLNASDNDKDGYKRAVYKIGQLLTYRAPR 216


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 202 NSSTFIQNFTSSPEKK*NN 258
           N+S  I+NF  SPE   +N
Sbjct: 409 NNSILIKNFNDSPESNRSN 427


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 67  WQKTDFQVFFAA*IW 111
           WQ TDF V F A  W
Sbjct: 307 WQNTDFVVCFNAKPW 321


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 302 ETITTLVKFIEGHLILFYFFSGELVKFCIN 213
           ETI T  K     ++L  F SG  V  CIN
Sbjct: 624 ETIETWNKLFGYQILLITFQSGLNVVSCIN 653


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,825
Number of Sequences: 336
Number of extensions: 2703
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -