Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0248
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.8  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   7.8  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   7.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 358 VNCEPTGCFLP 390
           ++C+PT C LP
Sbjct: 153 LDCDPTQCVLP 163


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -1

Query: 400 DCYVAKNNPWAHNLRKIYS*TNVRTTHKIGSCSD 299
           DCY+    P  HNL +     N  TT     C D
Sbjct: 71  DCYMLFREPQLHNLCR----KNCFTTDYFKGCID 100


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -1

Query: 400 DCYVAKNNPWAHNLRKIYS*TNVRTTHKIGSCSD 299
           DCY+    P  HNL +     N  TT     C D
Sbjct: 71  DCYMLFREPQLHNLCR----KNCFTTDYFKGCID 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,701
Number of Sequences: 336
Number of extensions: 3081
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)