Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0247
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.7  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   10.0 
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   10.0 

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 298 FDVRFTRLFETSITNPNDLMQIILNA 221
           F+V      +T +T   DLM+I++ A
Sbjct: 232 FEVMMQAAVDTEVTTSEDLMRILVTA 257


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = +2

Query: 290 DIEAILNSIVSIMVSIPLERGENLILAFSQRL 385
           D++ + + +  +   IP E  +NL+++  QR+
Sbjct: 206 DLDHLFDHMQEVWSKIPPETIQNLVMSMRQRM 237


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 328 GFYTIRKRRKPY 363
           G  T+RK+RKPY
Sbjct: 266 GNVTVRKKRKPY 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,088
Number of Sequences: 2352
Number of extensions: 10061
Number of successful extensions: 69
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)