Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0246
(534 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.33
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.44
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 29 0.58
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 28 1.0
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.1
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 7.1
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.4
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 25 9.4
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 25 9.4
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 9.4
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.33
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 368 TYTLFAILSSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEA 222
TY+ I SS+ L+ S L++++S +ASSS PI SSS VS A
Sbjct: 665 TYSSSVIPSSSTLVSSSSSLIVSSS-PVASSSSSPIP-SSSSLVSTYSA 711
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 29.1 bits (62), Expect = 0.44
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 434 TSELKTSLETTAKXXXXXXXX*TYTLFAILSSTPLIDRRSRLLLANSVRIASSSGKPIAF 255
TS + TSL ++A ++ SS+ + S +L ++S SSS
Sbjct: 7 TSSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPL 66
Query: 254 KSSSWVSPSEA 222
SSS+ SP+ +
Sbjct: 67 SSSSFTSPASS 77
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 28.7 bits (61), Expect = 0.58
Identities = 27/113 (23%), Positives = 49/113 (43%)
Frame = -1
Query: 345 KLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS*S*LSERRQHRKCREDNAF 166
KL N S+ T+ +S + E D++ T +S + S + C + +
Sbjct: 808 KLGKLNLSE-TSINERVMGFSTNINETDNYDD---NETTQSDTATSYEQLASVCVNELSG 863
Query: 165 PWIIFHYFGKHSGCEVIVSIFEHIREICDGCHCRDGDSKQTNDCLHVCLVPNS 7
++F YF + E ++ +H + D R GD+K + L +C +PNS
Sbjct: 864 KNVLFFYFLEDDS-EKLLKACQHFICVKDSIK-RLGDNKFEDKSLRICTIPNS 914
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 298 FASKSRDLRSIKGVELKMANKVYVHDGGKLDE 393
FA + ++L KGV+L M + +HDG L +
Sbjct: 79 FALRMKELADFKGVDLLMVDTGDLHDGNGLSD 110
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -3
Query: 403 LQNSRLVFHHHERILYSPF*AQRL*LI 323
L+ +++ H ++++SPF +QR+ L+
Sbjct: 901 LEKQWTLYYSHSKLMFSPFSSQRIILL 927
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 85 NLSNVLKNGNDNFTARMFTEVV 150
N N+LK ND AR +TE V
Sbjct: 56 NSQNLLKQLNDEMKARKYTETV 77
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -1
Query: 384 FSTIMNVYFIRHFKLNAFN*SKITAFTREFCSYSIVVREAD 262
F ++N YF+ + NA ++ T ++C ++ R+A+
Sbjct: 1072 FLEVLNSYFMSNTDSNAKRLQQLRRMTMDYCKRMLLDRKAN 1112
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 24 KHEDNHLFVYYRHRGNGSRHKSL*CAQKW 110
K E +F YY R GS + CA W
Sbjct: 657 KKEVRRIFQYYTDRTQGSSIEEKRCAMTW 685
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 153 FHYFGKHSGCEVIVS---IFEHIREICDGCHCRDGDSKQTNDCLH 28
F FG+H CEV+++ + EI G H D D + LH
Sbjct: 59 FWRFGRHKSCEVVLNGPRVSNFHFEIYQG-HRNDSDESENVVFLH 102
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = -2
Query: 344 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 165
SS P + + + + + SV +S G+P + SSS S + ++ + N E++
Sbjct: 95 SSNPRMPKSAHPISSRSVSASSHFGRPASAVSSSLNSSDDVRSMSDESMESYNDEKSVNA 154
Query: 164 PGLFFTTSVNILAVKLSFPFLS 99
L TT + ++++++ LS
Sbjct: 155 SAL-RTTEDRLRSMEMAYAQLS 175
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,111,653
Number of Sequences: 5004
Number of extensions: 41610
Number of successful extensions: 157
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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