Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0246
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 42 2e-04
01_01_1152 + 9170628-9171899 38 0.007
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 1.3
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 1.8
02_01_0384 - 2781362-2782299,2782320-2782428 29 2.4
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 3.1
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995... 28 4.1
11_01_0013 - 103484-103493,103787-103897,104279-104781,105119-10... 28 4.1
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 4.1
05_06_0044 - 25150322-25151260 28 4.1
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 5.4
01_06_0373 - 28841462-28842850 28 5.4
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 27 7.2
10_02_0112 + 5385660-5385821,5386337-5386876 27 7.2
08_01_0123 + 974941-975186,975274-977505 27 7.2
08_01_0227 + 1827461-1827674,1827844-1828143,1828272-1828434,182... 27 9.5
06_03_0416 + 20568087-20568702,20568767-20570313 27 9.5
06_03_0300 + 19299378-19299688,19299839-19300268 27 9.5
02_05_0387 - 28535947-28536130,28538615-28538788,28538824-285390... 27 9.5
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 42.3 bits (95), Expect = 2e-04
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Frame = +1
Query: 166 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIG---FPDDDAIRTE-----FASKSRDL 321
K++ +S S+ LA L + GET ++++ +G P A+ + A S
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 322 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 498
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 499 NTNNRIKDLV 528
T RIKD +
Sbjct: 152 ATAGRIKDFL 161
>01_01_1152 + 9170628-9171899
Length = 423
Score = 37.5 bits (83), Expect = 0.007
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +1
Query: 163 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKGV 339
G++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNT 117
Query: 340 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRI 516
A V+V G L FA + + + + DF+ A+ +N +V + T I
Sbjct: 118 --SFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLI 175
Query: 517 KDLVNP 534
+D++ P
Sbjct: 176 RDVLPP 181
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 357 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 223
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +1
Query: 274 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 399
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -2
Query: 344 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAER 177
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRR 264
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 292 TEFASKSRDLRSIKGVELKMANKVYVHDG 378
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>12_01_0013 -
99290-99299,99593-99703,100085-100587,100925-100995,
101413-101491,102336-102956
Length = 464
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 138 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDCLHVCLVPN 10
K GC+ + + + GCHC DG + + +DC L+ N
Sbjct: 386 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDCKKRTLLTN 430
>11_01_0013 -
103484-103493,103787-103897,104279-104781,105119-105189,
105607-105685,106530-107153
Length = 465
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 138 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDCLHVCLVPN 10
K GC+ + + + GCHC DG + + +DC L+ N
Sbjct: 387 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDCKKRTLLTN 431
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 332 LIDRRSRLLLANSVRIASSSGK 267
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>05_06_0044 - 25150322-25151260
Length = 312
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 361 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVN 531
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+++
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILS 57
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 293 QNSRVKAVIFDQLKALSLKWRIKYTFMMVEN*TRILQSFPGTSSIRTSKTLISRRI 460
+N + K +FD+LKA LK +T + EN +L F + +K I R++
Sbjct: 679 KNKKDKDEVFDELKAAGLKRPCSFTDISSEN--ALLLEFETATDAAAAKAHIRRQL 732
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 175 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 318
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 292 TEFASKSRDLRSIKGVELKMANKVYVHDG 378
T+ S S+D++ ++ V+ + N VHDG
Sbjct: 139 TQIPSASKDIKEVRAVDEFLPNDFVVHDG 167
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 40 ICLFTIAIAAMAAVTNLSNVLKNGNDNF--TARMFTEVVKNNPGKSVVLSAFSVLPPLAQ 213
+CL T+ + + ++ +S++LK G +NF ++ + VV+ P K + +F L +
Sbjct: 43 MCLSTLRYLSSSLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVR 102
Query: 214 LALASDGETHEELLK 258
L +T + K
Sbjct: 103 LCFNRKNKTLGAIFK 117
>08_01_0123 + 974941-975186,975274-977505
Length = 825
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 139 TEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 279
T ++ +P +L L +A A A+DG H L +G PDD
Sbjct: 617 TNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGGPDD 663
>08_01_0227 +
1827461-1827674,1827844-1828143,1828272-1828434,
1828453-1828489,1829207-1829737,1830677-1830829
Length = 465
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -1
Query: 375 IMNVYFIRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 223
++N+ +R ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 134 VLNI--VRRREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 182
>06_03_0416 + 20568087-20568702,20568767-20570313
Length = 720
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 394 NFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNP 534
+F VV ++ S +N+D+S+ + I+ E+ NN++ DL++P
Sbjct: 662 SFGVVIMEILCSR-RNLDYSQPEESCHLISMLQEKAKNNQLMDLIDP 707
>06_03_0300 + 19299378-19299688,19299839-19300268
Length = 246
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 144 FGKHSGCEVIVSIFEHIREICDGCHCRDGDSKQTNDCLHVCLVP 13
F K CE I+ +++ + + CR D+K H + P
Sbjct: 111 FPKSYDCEYILVAVDYVSKWVEAMPCRAADAKHARQMFHEIIFP 154
>02_05_0387 -
28535947-28536130,28538615-28538788,28538824-28539023,
28539090-28539234,28539403-28539509
Length = 269
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 18 RGKHEDNHLFVYYRHRG 68
RG+H D++LFVYY + G
Sbjct: 186 RGQHYDSYLFVYYVNGG 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,358,863
Number of Sequences: 37544
Number of extensions: 264258
Number of successful extensions: 836
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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