Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0246
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 62 3e-10
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 49 3e-06
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 43 1e-04
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 29 2.4
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 29 2.4
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 29 3.2
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) 28 5.5
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 28 5.5
SB_24969| Best HMM Match : DUF645 (HMM E-Value=1.8) 28 5.5
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_21279| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_14015| Best HMM Match : Phage_integrase (HMM E-Value=0.12) 28 5.5
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_56627| Best HMM Match : Adeno_E4 (HMM E-Value=6.6) 28 5.5
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_47025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_27552| Best HMM Match : Phage_integrase (HMM E-Value=0.31) 28 5.5
SB_16669| Best HMM Match : Phage_integrase (HMM E-Value=0.28) 28 5.5
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 7.3
SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 27 9.6
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 27 9.6
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/117 (27%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 181 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 360
S S++ LA L + G T ++ K FP D + ++ + + G ++ MAN+
Sbjct: 33 SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92
Query: 361 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLV 528
++ G ++ E F S++ F++++ +D+ KN+ A+ ++N WVE+ T ++IK+L+
Sbjct: 93 LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLI 149
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 205 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 372
L + L S G T ++ G+ + + T K L S G E+++ NK++ H
Sbjct: 5 LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64
Query: 373 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV 528
D ++ E F +R+ ++S++ +DF +K A K +N WV + T IK+L+
Sbjct: 65 DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELI 117
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 340 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 516
E+ +AN +++ + + F + + +++D+ +D+ + A K +N WVEE T +I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 517 KDLVNP 534
DL+ P
Sbjct: 109 CDLIAP 114
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 392 RILQSFPGTSSIRTSKTLISRRIQSQLS 475
R+ SFPG S TL++R QSQ+S
Sbjct: 65 RLYDSFPGASRSEAESTLLARMRQSQVS 92
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 382 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 522
K +E+ + S +F+ + +N+DFS + ++ DW VE N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 67 AMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDG 234
+MAAV + +L+ + + + ++KNN +S+ AF+ L L L L+S+G
Sbjct: 36 SMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNG 91
>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 28.7 bits (61), Expect = 3.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 75 CHCRDGDSKQTNDCL 31
CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350
>SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1)
Length = 1118
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 828 QHDANSSTLYCAFLFAFFLMARIANI 853
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
HQ L + E + ++PK PR +F L
Sbjct: 56 HQNLSINEMDSSSPKRPRQHQFGL 79
>SB_24969| Best HMM Match : DUF645 (HMM E-Value=1.8)
Length = 336
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 214 QHDANSSTLYCAFLFAFFLMARIANI 239
>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_21279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 318 QHDANSSTLYCAFLFAFFLMARIANI 343
>SB_14015| Best HMM Match : Phage_integrase (HMM E-Value=0.12)
Length = 269
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 73 QHDANSSTLYCAFLFAFFLMARIANI 98
>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
HQ L + E + ++PK PR +F L
Sbjct: 50 HQNLSINEMDSSSPKRPRQHQFGL 73
>SB_56627| Best HMM Match : Adeno_E4 (HMM E-Value=6.6)
Length = 390
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 263 QHDANSSTLYCAFLFAFFLMARIANI 288
>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_47025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 690 QHDANSSTLYCAFLFAFFLMARIANI 715
>SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 58 QHDANSSTLYCAFLFAFFLMARIANI 83
>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
HQ L + E + ++PK PR +F L
Sbjct: 7 HQNLSINEMDSSSPKCPRQHQFGL 30
>SB_27552| Best HMM Match : Phage_integrase (HMM E-Value=0.31)
Length = 270
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 73 QHDANSSTLYCAFLFAFFLMARIANI 98
>SB_16669| Best HMM Match : Phage_integrase (HMM E-Value=0.28)
Length = 580
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 13 RHEANMKTIICLFTIAIAAMAAVTNL 90
+H+AN T+ C F A MA + N+
Sbjct: 383 QHDANSSTLYCAFLFAFFLMARIANI 408
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 27.5 bits (58), Expect = 7.3
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 375 WWKTRREFCSRFQGRLQFGRPK 440
W + RRE+C++ Q R ++ +P+
Sbjct: 1275 WLRWRREYCTQLQSRQKWNKPQ 1296
>SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 232 HQKLKLTEREEAAPKMPRGQRF 167
H+ L + ER+ ++PK PR +F
Sbjct: 21 HENLSINERDSSSPKRPRQHQF 42
>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 148 VKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAI 288
++ P S VLS S PPL + + T + + I PD++A+
Sbjct: 221 IELGPQSSGVLSLTSDPPPLEAMGKEGEAHTDSGVEEEIDIPDEEAV 267
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 406 VSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKD 522
V+ +VF++DV ++DFS + ++ +E +N ++D
Sbjct: 713 VNDEVFDTDVIDVDFSGDMAGKGKVSGNADEVSNVEVRD 751
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 123 EVIVSIFEHIREICDGCH 70
+VI++ +EH + CDGCH
Sbjct: 356 DVIIARYEHNKCRCDGCH 373
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,617,290
Number of Sequences: 59808
Number of extensions: 310179
Number of successful extensions: 1032
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -