Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0245
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-1|AAK18854.2|  469|Caenorhabditis elegans Hypothetical pr...   112   1e-25
Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U80453-1|AAK31444.1|  403|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U58756-8|AAY44005.1|  183|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U41559-5|AAC24258.1|  217|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U23147-2|AAC46688.1|  918|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein ...    27   9.1  
AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 prote...    27   9.1  

>U32305-1|AAK18854.2|  469|Caenorhabditis elegans Hypothetical
           protein B0336.6 protein.
          Length = 469

 Score =  112 bits (270), Expect = 1e-25
 Identities = 56/124 (45%), Positives = 78/124 (62%)
 Frame = +2

Query: 80  TKNYTTQSLASVAYQINTLAYNFLQLLELQTMQLAEMEGQMNHIAQTVAIHKEKVARREI 259
           +K +  Q+LASVAYQIN +  +   +L LQT ++  +  Q+ +++Q V +HKEK+ARREI
Sbjct: 52  SKKFAIQALASVAYQINKMVTDLHDMLALQTDKVNSLTNQVQYVSQVVDVHKEKLARREI 111

Query: 260 GVLTANKVTNRQYKIIAPANPEKPIKYVRKSIDYTALDDIGHGAHWSSGATGTPRGRRSS 439
           G LT NK   +Q KIIAPA P++  +Y R  ID++ LD IGHG   S      P  R +S
Sbjct: 112 GSLTTNKTLFKQPKIIAPAIPDEKQRYQRTPIDFSVLDGIGHGVRTSDPPRAAPISRATS 171

Query: 440 SAPG 451
           S  G
Sbjct: 172 SISG 175



 Score = 31.1 bits (67), Expect = 0.56
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 25 YCEANYFQSENKRLALERYEK 87
          YCE NY QS NK  ALE  +K
Sbjct: 34 YCEDNYIQSNNKSAALEESKK 54


>Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical
           protein M163.8 protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 427 ASLELCSRGGSSTGSNNQASNATCGCQVLISCQHW 531
           AS  LCS   S+T S+  +S++TCG     +C  W
Sbjct: 53  ASCRLCSGASSTTSSSASSSSSTCG-DSNSNCASW 86


>U80453-1|AAK31444.1|  403|Caenorhabditis elegans Hypothetical
           protein C23H3.5 protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 375 TLGMVLTGVVGQLEHRVGVARALLPGWLLYRLQQPSLQRHLRLSG 509
           T+  +L  +VGQL++ +      +  WL+Y+   P   RH +  G
Sbjct: 47  TMHFLLKSIVGQLKNPINTEAEAIAQWLIYKQTGP--HRHQKFFG 89


>Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical
           protein Y7A9C.7 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = -1

Query: 334 YWLL-RVCWCNDLILPIGDFICCKNSNLTTCYFFFVYGNRLGY---VIHLAFHLS 182
           +W+L  +C   DL+  +  +   + S   TC  FF+  N L     ++H+  +LS
Sbjct: 149 FWILYAICIIKDLVFVMATYKGYQKSFQITCLIFFIIFNMLSLLSALLHIPIYLS 203


>U58756-8|AAY44005.1|  183|Caenorhabditis elegans Hypothetical
           protein F58F9.11 protein.
          Length = 183

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +1

Query: 385 WCSLE*WG--NWNTAWASLELC---SRGGSSTGSNNQASNATCGCQVLISCQ 525
           W S   +G  + +T W     C   S G + TG NN  S  TC C+ + S +
Sbjct: 96  WSSFSSYGRNDGDTMWIRTRRCLSESAGCNCTG-NNTESTTTCPCRAMTSIE 146


>U41559-5|AAC24258.1|  217|Caenorhabditis elegans Hypothetical
           protein C26B2.2 protein.
          Length = 217

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = +2

Query: 200 MNHIAQTVAIHKEKVARREIGVLTANKVTNRQYKIIAPANPEKPIKYVRKSIDYTA 367
           MN   Q +     +  R  + +   NK+  R Y   AP++   P  YV   + Y++
Sbjct: 111 MNPAKQVLKGRNTRKKRSMVDLSQINKIFGRDYNPPAPSSKSPPTIYVNLGVIYSS 166


>U23147-2|AAC46688.1|  918|Caenorhabditis elegans Hypothetical
           protein C18H9.3 protein.
          Length = 918

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 409 NWNTAWASLELCSRGGSSTGSNNQAS 486
           N+N +W      +RGGS +  NN++S
Sbjct: 14  NFNPSWMRPNAANRGGSISSGNNRSS 39


>U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein 756
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 419 VFQLPHYSSEHHAQCHPKL 363
           V Q PH++S HH   HP++
Sbjct: 372 VTQAPHHNSHHHHHHHPRV 390


>AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 protein
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 419 VFQLPHYSSEHHAQCHPKL 363
           V Q PH++S HH   HP++
Sbjct: 372 VTQAPHHNSHHHHHHHPRV 390


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,877,290
Number of Sequences: 27780
Number of extensions: 303694
Number of successful extensions: 1013
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)