Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0245
         (559 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   4.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   4.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   6.4  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   6.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 292 PIGDFIC-CKNSNLTTCYFF 236
           PIG  +  C N N+TTC  F
Sbjct: 703 PIGKALSKCHNRNVTTCNMF 722


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 236 EKVARREIGVLTANKVTNRQYK 301
           +K  +R++   T NK+ N +YK
Sbjct: 433 KKDNKRKLSDSTMNKINNHEYK 454


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 35  PIIFNPKINVSLWKGTKNYTT 97
           P++ NP+I +     + NYTT
Sbjct: 169 PLVVNPEIELPQLDISNNYTT 189


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 546 PRPSVPVLAADEDL 505
           P PS+P+  AD+DL
Sbjct: 474 PLPSLPLPGADDDL 487


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 209 CDSSGLPSQPIAW 171
           CD +G P  P+ W
Sbjct: 332 CDVTGTPPPPLVW 344


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 413 QLPHYSSEHHAQCHPK 366
           Q PH    HH   HP+
Sbjct: 808 QPPHQQLHHHQSTHPQ 823


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 233 CVWQPFGLCD 204
           C+W+ FGL D
Sbjct: 75  CLWEQFGLVD 84


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 196 PDESHSPNGCHT 231
           P  SHS NG HT
Sbjct: 75  PVSSHSSNGIHT 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,720
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)