Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0245
         (559 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26150.1 68418.m03110 protein kinase family protein contains ...    33   0.13 
At5g02340.1 68418.m00157 DC1 domain-containing protein contains ...    29   1.6  
At2g15020.1 68415.m01710 expressed protein  and genefinder             29   2.1  
At3g17860.2 68416.m02277 expressed protein                             29   2.8  
At3g17860.1 68416.m02276 expressed protein                             29   2.8  
At2g46225.1 68415.m05748 expressed protein                             29   2.8  
At2g13950.1 68415.m01550 DC1 domain-containing protein contains ...    29   2.8  
At5g18530.1 68418.m02191 beige/BEACH domain-containing protein c...    28   4.9  
At5g12000.1 68418.m01403 protein kinase family protein contains ...    28   4.9  
At4g09280.1 68417.m01536 Ulp1 protease family protein contains P...    28   4.9  
At4g37160.1 68417.m05261 multi-copper oxidase type I family prot...    27   6.4  
At4g11090.1 68417.m01801 expressed protein other hypothetical pr...    27   8.5  
At2g02700.1 68415.m00210 DC1 domain-containing protein contains ...    27   8.5  

>At5g26150.1 68418.m03110 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 703

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 167 QTMQLAEMEGQMNHIAQTVAIHKEKVARREIGVLTANKVTNRQYKI 304
           +  ++AE+EGQ    A+  A+ +EK   R +  L  N V  R+Y I
Sbjct: 367 KAQRMAELEGQRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKYSI 412


>At5g02340.1 68418.m00157 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 631

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 328 LLRVCWCNDLILPIGDFIC--CKNSNLTTCYFF 236
           +L + WCN+      DF C  CK +NL T Y+F
Sbjct: 93  VLPLFWCNNKEPNGADFCCSACKITNLGTAYYF 125


>At2g15020.1 68415.m01710 expressed protein  and genefinder
          Length = 526

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 482 AWLLEPVEEPPREQSSSDAHAVFQL 408
           +W+ E  E+P  E S SD+HAVFQL
Sbjct: 5   SWICELPEDP--EFSESDSHAVFQL 27


>At3g17860.2 68416.m02277 expressed protein
          Length = 339

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 445 SRGGSSTGSNNQASNATCGCQVLISC 522
           +RG +ST  NNQA+ +   C V +SC
Sbjct: 252 TRGLTSTYHNNQANGSNINCPVPVSC 277


>At3g17860.1 68416.m02276 expressed protein
          Length = 352

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 445 SRGGSSTGSNNQASNATCGCQVLISC 522
           +RG +ST  NNQA+ +   C V +SC
Sbjct: 265 TRGLTSTYHNNQANGSNINCPVPVSC 290


>At2g46225.1 68415.m05748 expressed protein
          Length = 298

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 4   QEFGTRDYCEANYFQSENKRLALE 75
           Q +   DYCE +Y  SE K++ L+
Sbjct: 39  QLYSAADYCEKSYLHSEQKQMVLD 62


>At2g13950.1 68415.m01550 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 517

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -1

Query: 313 WCNDLILPIGDFIC--CKNSNLTTCYFF 236
           WCN+      DF C  CK +NL T Y+F
Sbjct: 20  WCNNKEPNGADFCCSACKLTNLGTAYYF 47


>At5g18530.1 68418.m02191 beige/BEACH domain-containing protein
           contains 5 WD-40 repeats (PF00400); contains
           Beige/BEACH domain (Pfam PF02138);  FACTOR ASSOCIATED
           WITH N-SMASE ACTIVATION (FAN) (SP:Q92636) Homo
           sapiens;similar to Lipopolysaccharide-responsive and
           beige-like anchor protein (CDC4-like protein)
           (Beige-like protein) (SP:P50851) [Homo sapiens}
          Length = 909

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 406 GNWNTAWASLEL--CSRGGSSTGSNNQASNATCGCQVLISCQH 528
           GN N A  S E   CS  GS    ++   N TCG    ++C+H
Sbjct: 94  GNSNDAVESDECLDCSTSGSQATEDDDTENITCGS---VTCEH 133


>At5g12000.1 68418.m01403 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 703

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 167 QTMQLAEMEGQMNHIAQTVAIHKEKVARREIGVLTANKVTNRQYKI 304
           +  ++AE+EGQ    A+  A  + +   R +  L  N V  R+Y I
Sbjct: 367 KAQRMAELEGQRRKQAEMKARRESQEKDRALSALVQNDVRYRKYSI 412


>At4g09280.1 68417.m01536 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 298

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 90  TPPNHWLVLHTRLIL*HTISYNC 158
           T  NHW+ LH  L+  H   Y+C
Sbjct: 162 TGGNHWVTLHVNLLRSHIDCYDC 184


>At4g37160.1 68417.m05261 multi-copper oxidase type I family protein
           contains Pfam profile: PF00394 Multicopper oxidase
          Length = 541

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 20/77 (25%), Positives = 32/77 (41%)
 Frame = +2

Query: 158 LELQTMQLAEMEGQMNHIAQTVAIHKEKVARREIGVLTANKVTNRQYKIIAPANPEKPIK 337
           ++  TM L E+EG   H  Q      +    + + VL   K + R Y I+A     KP+ 
Sbjct: 232 IQNHTMSLIEVEGA--HTLQESYESLDVHVGQSMTVLVTLKASVRDYFIVASTRFTKPVL 289

Query: 338 YVRKSIDYTALDDIGHG 388
               S+ Y    +  +G
Sbjct: 290 TTTASLRYQGSKNAAYG 306


>At4g11090.1 68417.m01801 expressed protein other hypothetical
           proteins - Arabidopsis thaliana
          Length = 432

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 331 WLLRVCWCNDLILPIGDFICCKNSNLTTCYFFFVYGNRLGYVI 203
           W L+    ++   P+G   C ++SN+T   F + Y   L +V+
Sbjct: 250 WFLKTAVYHENANPVGCHGCPESSNMTDLGFDYAYNTSLRHVM 292


>At2g02700.1 68415.m00210 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 499

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -1

Query: 328 LLRVCWCNDLIL-PIGDFICCKNSNLTTCYFFFV 230
           +L + WCN+    P  D   C    + TCY+F V
Sbjct: 113 ILPLFWCNNKEADPKNDCSICNTRKVGTCYYFCV 146


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,201,809
Number of Sequences: 28952
Number of extensions: 276299
Number of successful extensions: 882
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)