Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0244
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     28   0.041
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    28   0.041
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           28   0.041
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    28   0.041
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         27   0.096
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.51 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   3.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   3.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   4.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   8.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 0.041
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 112 ATFLVTPSTT--SQACPDHLTAPPTDPKFHPRAEFLQ 8
           ++FL+ P T   +   P H++    DPKF P  E+ Q
Sbjct: 3   SSFLMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQ 39


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 0.041
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 112 ATFLVTPSTT--SQACPDHLTAPPTDPKFHPRAEFLQ 8
           ++FL+ P T   +   P H++    DPKF P  E+ Q
Sbjct: 3   SSFLMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQ 39


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 0.041
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 112 ATFLVTPSTT--SQACPDHLTAPPTDPKFHPRAEFLQ 8
           ++FL+ P T   +   P H++    DPKF P  E+ Q
Sbjct: 3   SSFLMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQ 39


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 27.9 bits (59), Expect = 0.041
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 112 ATFLVTPSTT--SQACPDHLTAPPTDPKFHPRAEFLQ 8
           ++FL+ P T   +   P H++    DPKF P  E+ Q
Sbjct: 3   SSFLMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQ 39


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.096
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 16  IRHEGGTLDQLVGLSDDLGKLETS 87
           ++ EGGT  QL+ L  D GKL  S
Sbjct: 99  LQEEGGTTSQLIELLGDAGKLLAS 122


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 275 FAYDVGDIPQTLLYGVLSHVPLEASQISGEVT 180
           FA  +G   Q  +Y V+ H P ++  +SG +T
Sbjct: 8   FAMTLGQ--QNKMYNVIQHSPQQSIIVSGSIT 37


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 219 CPIGSESNKWGGHCYWP 169
           CP G   N   G C WP
Sbjct: 138 CPNGLVYNDKAGICSWP 154


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 17  FGTRVELWISW 49
           F TR +LW+SW
Sbjct: 377 FLTRGDLWLSW 387


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 140 IFKYLSQVLGY 108
           IFKY+ Q+ GY
Sbjct: 105 IFKYIDQMAGY 115


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 140 IFKYLSQVLGY 108
           IFKY+ Q+ GY
Sbjct: 61  IFKYIDQMAGY 71


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 58  SDDLGKLETSSKV*PGR*PSTCERYLKI 141
           SD L K+   S   P R  S  E Y+KI
Sbjct: 46  SDALDKIRYESLTNPSRLDSGKELYIKI 73


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 106 FLVTPSTTSQACPDHLTAPPTDPKF 32
           F   PST     P  +T PP  P F
Sbjct: 177 FTTKPSTKPTNKPVVVTKPPQAPPF 201


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -3

Query: 222  PCPIGSESNKWGGHCYWPSSFHG 154
            PCP     N     C WP +  G
Sbjct: 946  PCPSNLVFNPDQNVCDWPENVEG 968


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 165 LMANNSDLPTYLTRFQW 215
           LMA +   PTY+ +F++
Sbjct: 407 LMAKSMKSPTYVLKFEY 423


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 216 PIGSESNKWGGHCYWPSSFH 157
           P+G ++   GG C +P   H
Sbjct: 292 PLGYDAYYCGGECEYPIPDH 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,574
Number of Sequences: 336
Number of extensions: 1823
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)