Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0244
         (413 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h at...   121   2e-28
AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein...   121   2e-28
AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h at...    39   0.002
Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U29082-4|AAT92084.1|  279|Caenorhabditis elegans Troponin t prot...    27   4.1  
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot...    27   4.1  
U29082-2|AAT92082.1|  350|Caenorhabditis elegans Troponin t prot...    27   4.1  
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p...    27   5.4  
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.     27   5.4  
AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z68751-9|CAA92979.2|  238|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z68337-11|CAA92754.2|  238|Caenorhabditis elegans Hypothetical p...    27   7.1  
Z68012-3|CAA92017.1|  269|Caenorhabditis elegans Hypothetical pr...    26   9.4  
Z50857-6|CAA90720.1|  283|Caenorhabditis elegans Hypothetical pr...    26   9.4  
Z50806-6|CAA90692.1|  283|Caenorhabditis elegans Hypothetical pr...    26   9.4  
AL032632-1|CAA21582.1|  248|Caenorhabditis elegans Hypothetical ...    26   9.4  

>AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoforma protein.
          Length = 384

 Score =  121 bits (291), Expect = 2e-28
 Identities = 55/101 (54%), Positives = 76/101 (75%)
 Frame = +3

Query: 90  EGVTRKVAQYL*EVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIADII 269
           E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++II
Sbjct: 68  EAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEII 127

Query: 270 SKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNL 392
            KQ+ QID DLKVKS  YN LK  L ++++K  GSLLT++L
Sbjct: 128 GKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDL 168



 Score = 38.7 bits (86), Expect = 0.002
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +1

Query: 31  GTLDQLVGLSDDLGKLETSSK 93
           GTLDQLVGLSDDL KL+TS++
Sbjct: 48  GTLDQLVGLSDDLSKLDTSAE 68


>AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein
           protein.
          Length = 384

 Score =  121 bits (291), Expect = 2e-28
 Identities = 55/101 (54%), Positives = 76/101 (75%)
 Frame = +3

Query: 90  EGVTRKVAQYL*EVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIADII 269
           E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++II
Sbjct: 68  EAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEII 127

Query: 270 SKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNL 392
            KQ+ QID DLKVKS  YN LK  L ++++K  GSLLT++L
Sbjct: 128 GKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDL 168



 Score = 38.7 bits (86), Expect = 0.002
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +1

Query: 31  GTLDQLVGLSDDLGKLETSSK 93
           GTLDQLVGLSDDL KL+TS++
Sbjct: 48  GTLDQLVGLSDDLSKLDTSAE 68


>AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoformb protein.
          Length = 133

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +1

Query: 31  GTLDQLVGLSDDLGKLETSSK 93
           GTLDQLVGLSDDL KL+TS++
Sbjct: 48  GTLDQLVGLSDDLSKLDTSAE 68



 Score = 34.3 bits (75), Expect = 0.035
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 90  EGVTRKVAQYL*EVLEDQRDKLHENLMANN 179
           E V RK+ QY  EVLE+ + K+ ENL+  N
Sbjct: 68  EAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97


>Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical
           protein F35G12.10 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 195 YLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKG 338
           YL   +   A++   Q L+ I D + KQV Q D   K   +A   LKG
Sbjct: 251 YLKETEETKARFERDQLLKLINDSVEKQVSQKDFQEKFLQNAIQQLKG 298


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
           protein F54B3.1b protein.
          Length = 3394

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 233 HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDREL 376
           H +ES+     HK  G  DR    G ++ +QR     T+ R E  ++L
Sbjct: 187 HLSESSAASTSHKNDGDADRAMDGGNLMSIQRGIWSATE-RHEDQKQL 233


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
           protein F54B3.1a protein.
          Length = 3396

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 233 HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDREL 376
           H +ES+     HK  G  DR    G ++ +QR     T+ R E  ++L
Sbjct: 187 HLSESSAASTSHKNDGDADRAMDGGNLMSIQRGIWSATE-RHEDQKQL 233


>U29082-4|AAT92084.1|  279|Caenorhabditis elegans Troponin t protein
           3, isoform c protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +2

Query: 233 HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDREL 376
           H+ E     + +++  RT+R   E ++ +L+  Q K    RE+ ++E+
Sbjct: 64  HEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111


>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
            3, isoform b protein.
          Length = 1178

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +2

Query: 233  HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDREL 376
            H+ E     + +++  RT+R   E ++ +L+  Q K    RE+ ++E+
Sbjct: 898  HEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 945


>U29082-2|AAT92082.1|  350|Caenorhabditis elegans Troponin t protein
           3, isoform a protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +2

Query: 233 HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDREL 376
           H+ E     + +++  RT+R   E ++ +L+  Q K    RE+ ++E+
Sbjct: 64  HEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111


>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
           protein 83, isoform a protein.
          Length = 1041

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 252 NIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKK 362
           ++  +I     ++D  L+  SS YN +  +LHNL  K
Sbjct: 21  HLLKVIESSAEEVDIFLENCSSLYNLILDSLHNLTSK 57


>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
          Length = 1041

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 252 NIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKK 362
           ++  +I     ++D  L+  SS YN +  +LHNL  K
Sbjct: 21  HLLKVIESSAEEVDIFLENCSSLYNLILDSLHNLTSK 57


>AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical
           protein F02E11.1 protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 248 QTLLYGVLSHVPLEASQISGEVTVIGHQVFMELIALIFKYLSQV 117
           +T L  +L+H+     +  G+VTV G ++  + +  +  Y+ QV
Sbjct: 8   KTTLMNILAHLDTNGVEYLGDVTVNGKKITKQKMRQMCAYVQQV 51


>Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical
           protein C11G6.3 protein.
          Length = 385

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 230 PHKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRE 373
           P  + S+++  HH +  R D+   + +  R  R + K  +  E  +RE
Sbjct: 108 PSSSSSSKHHHHHHKKERKDKEHKKHKKDREHRDREKERERDERKERE 155


>Z68751-9|CAA92979.2|  238|Caenorhabditis elegans Hypothetical
           protein T05E11.7 protein.
          Length = 238

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/57 (21%), Positives = 30/57 (52%)
 Frame = +2

Query: 230 PHKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGPI 400
           P KAE  + R+  K      ++GS  +  + ++++ K ++ ++E  ++  D + G +
Sbjct: 53  PEKAEDKQNRKSKKSENEKSKKGSSKKSEKKEKTEEKKSK-KDEPKKDEEDAKKGDV 108


>Z68337-11|CAA92754.2|  238|Caenorhabditis elegans Hypothetical
           protein T05E11.7 protein.
          Length = 238

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/57 (21%), Positives = 30/57 (52%)
 Frame = +2

Query: 230 PHKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGPI 400
           P KAE  + R+  K      ++GS  +  + ++++ K ++ ++E  ++  D + G +
Sbjct: 53  PEKAEDKQNRKSKKSENEKSKKGSSKKSEKKEKTEEKKSK-KDEPKKDEEDAKKGDV 108


>Z68012-3|CAA92017.1|  269|Caenorhabditis elegans Hypothetical
           protein T24D5.3 protein.
          Length = 269

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 213 WDMA---KYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLT 383
           WD A   +  I + L    + I  + GQ++ D K+K   YN L+   + L+K+    LLT
Sbjct: 183 WDRASLKRAEIAEDLLIAEEFIEARRGQLEQDDKLKVYLYNVLE---NKLKKENNPVLLT 239


>Z50857-6|CAA90720.1|  283|Caenorhabditis elegans Hypothetical
           protein M79.2 protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 323 QRSQRKPTQFREETDRELVDPQLGP 397
           QRS++   Q  EE  + ++D  LGP
Sbjct: 107 QRSEKSADQIAEERVKRIIDTDLGP 131


>Z50806-6|CAA90692.1|  283|Caenorhabditis elegans Hypothetical
           protein M79.2 protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 323 QRSQRKPTQFREETDRELVDPQLGP 397
           QRS++   Q  EE  + ++D  LGP
Sbjct: 107 QRSEKSADQIAEERVKRIIDTDLGP 131


>AL032632-1|CAA21582.1|  248|Caenorhabditis elegans Hypothetical
           protein Y11D7A.4 protein.
          Length = 248

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = +3

Query: 156 HENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKV 308
           H+N   +N  +PTY++    D      +Q++  + + +     +++AD+++
Sbjct: 167 HKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEVLN-VGLSRAEVEADIEI 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,465,669
Number of Sequences: 27780
Number of extensions: 183301
Number of successful extensions: 628
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)