Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0244
(413 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g12840.1 68414.m01491 vacuolar ATP synthase subunit C (VATC) ... 80 5e-16
At4g18600.1 68417.m02755 expressed protein 29 0.94
At2g25450.1 68415.m03048 2-oxoglutarate-dependent dioxygenase, p... 29 1.6
At2g18480.1 68415.m02153 mannitol transporter, putative similar ... 29 1.6
At4g13540.1 68417.m02111 expressed protein 28 2.2
At5g26330.1 68418.m03147 plastocyanin-like domain-containing pro... 28 2.9
At5g56040.1 68418.m06992 leucine-rich repeat protein kinase, put... 27 3.8
At3g59180.1 68416.m06598 hypothetical protein contains a novel d... 27 5.0
At2g40130.2 68415.m04936 heat shock protein-related contains sim... 27 5.0
At2g40130.1 68415.m04935 heat shock protein-related contains sim... 27 5.0
At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase, p... 27 6.6
At1g10180.1 68414.m01148 expressed protein 27 6.6
At5g24830.1 68418.m02934 pentatricopeptide (PPR) repeat-containi... 26 8.7
At3g05100.1 68416.m00554 expressed protein 26 8.7
At2g30830.1 68415.m03759 2-oxoglutarate-dependent dioxygenase, p... 26 8.7
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 26 8.7
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 26 8.7
>At1g12840.1 68414.m01491 vacuolar ATP synthase subunit C (VATC) /
V-ATPase C subunit / vacuolar proton pump C subunit
(DET3) identical to vacuolar ATP synthase subunit C
SP:Q9SDS7 from [Arabidopsis thaliana]
Length = 375
Score = 80.2 bits (189), Expect = 5e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Frame = +3
Query: 87 VEGVTRKVAQYL*EVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIADI 266
VEGV++K+ + + E LE L + + +YLTRF WD AKYP L+ + D
Sbjct: 66 VEGVSQKIRRQI-EELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDN 124
Query: 267 ISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNL 392
I QV +I+ DLKV+ + YN ++G L+ + +KQ+GSL R+L
Sbjct: 125 IQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDL 166
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 29.5 bits (63), Expect = 0.94
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 7 AAGIRHEGGTLDQLVGLSDDLGKLETSSKV*PGR*PSTCERYLKISAISSM 159
A I +E TLD+ VG+ LG++ +V P + +TC K + I ++
Sbjct: 1032 AEAIPNEQVTLDEFVGIDPCLGEVVLDEEVLPEQLDTTCRSLTKAAPIMTI 1082
>At2g25450.1 68415.m03048 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 359
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 284 SDLFAYDVGDIPQTLLYGVLSHVPL--EASQISGEVTVIGHQVFMELIALIFKYLSQVLG 111
+DL+ TL + VP + ++ GE+ + + M+L L+F+ LS+ LG
Sbjct: 135 ADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALG 194
Query: 110 YLPGH 96
P H
Sbjct: 195 LSPNH 199
>At2g18480.1 68415.m02153 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 508
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -1
Query: 263 VGDIPQTLLYGVLSHVPLEASQISGEVT-VIGHQVFMELIALIFKYLSQVLGYLPGH 96
+ D +L G+L+ L S +G+ + VIG + + L A+IF S ++GY P +
Sbjct: 56 INDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNY 112
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 267 ISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLGRSS 404
++K V ++ ++K + LKG ++ +EK+Q G +L R S
Sbjct: 133 VAKAVQELRKEVKARGETIETLKGRINLMEKQQNGKEREIDLLRQS 178
>At5g26330.1 68418.m03147 plastocyanin-like domain-containing
protein / mavicyanin, putative similar to mavicyanin
SP:P80728 from [Cucurbita pepo]
Length = 187
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -1
Query: 98 HTFDDVSSLPRSSDSPTN*SKVPPSCRIPAA 6
H SS P S D PT+ S PPS IPAA
Sbjct: 120 HVLLPASSTPLS-DPPTSSSSSPPSTTIPAA 149
>At5g56040.1 68418.m06992 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 953
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -1
Query: 260 GDIPQTLLYGV-LSHVPLEASQISGEV-TVIGHQVFMELIALIFKYLSQVLGYLP 102
G IP+ L L+H+ ++ +QISGE+ +IG + + + F + +Q+ G +P
Sbjct: 351 GTIPEELANCTKLTHLEIDNNQISGEIPPLIGK---LTSLTMFFAWQNQLTGIIP 402
>At3g59180.1 68416.m06598 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 475
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 35 LWISWWGCQMIWASLRRRR 91
LWI +W C+ I S RRR
Sbjct: 14 LWIEYWHCKAILLSKHRRR 32
>At2g40130.2 68415.m04936 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 910
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 249 RNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLL 380
R I+ + +K G+ L V SAY L L++LEK QT ++
Sbjct: 221 RRISAVFTKDKGR--NPLLVGVSAYGVLTSYLNSLEKNQTDGMI 262
>At2g40130.1 68415.m04935 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 491
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 249 RNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLL 380
R I+ + +K G+ L V SAY L L++LEK QT ++
Sbjct: 221 RRISAVFTKDKGR--NPLLVGVSAYGVLTSYLNSLEKNQTDGMI 262
>At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 362
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 197 ISGEVTVIGHQVFMELIALIFKYLSQVLGYLPGH 96
I GE+ + + M+L LIF+ LS+ LG P H
Sbjct: 170 ICGEIMLEYAKRVMKLGELIFELLSEALGLNPNH 203
>At1g10180.1 68414.m01148 expressed protein
Length = 769
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 173 GHQVFMELIALIFKYLSQVLGYLPGHTFDDVSSLPRSSDS 54
G V ++ L KY+ ++ LPGH+ +D LP D+
Sbjct: 418 GESVLTRILQLYDKYIDFLIKALPGHSDED--GLPELQDN 455
>At5g24830.1 68418.m02934 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 593
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 277 CLLMMSAIFRRLCFMGYLAMSHWKRVK 197
CL + S+I R LC G L + W R K
Sbjct: 120 CLSIHSSIMRDLCLQGKLDAALWLRKK 146
>At3g05100.1 68416.m00554 expressed protein
Length = 336
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 106 FLVTPSTTSQACPDHLTAPPTD 41
FL++ S +S +CP+ L++ PTD
Sbjct: 35 FLLSSSFSSCSCPEALSSSPTD 56
>At2g30830.1 68415.m03759 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 358
Score = 26.2 bits (55), Expect = 8.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -1
Query: 281 DLFAYDVGDIPQTLLYGVLSHVPL--EASQISGEVTVIGHQVFMELIALIFKYLSQVLGY 108
DL++ + TL + VP + I E+ + + M+L LIF+ LS+ LG
Sbjct: 136 DLYSSQAANWRDTLTMVMAPDVPQAGDLPVICREIMLEYSKRMMKLGELIFELLSEALGL 195
Query: 107 LPGH 96
P H
Sbjct: 196 KPNH 199
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 234 IKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLGRS 401
+ + + N+ D+I+K+ ++ KVK + +LK L NL S ++G S
Sbjct: 810 LMEQVSNLKDVIAKKDEELQNFQKVKGNNATSLKRGLSNLRLVGPTSPRRHSIGAS 865
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 234 IKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLGRS 401
+ + + N+ D+I+K+ ++ KVK + +LK L NL S ++G S
Sbjct: 810 LMEQVSNLKDVIAKKDEELQNFQKVKGNNATSLKRGLSNLRLVGPTSPRRHSIGAS 865
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,127,887
Number of Sequences: 28952
Number of extensions: 175730
Number of successful extensions: 620
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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