Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0243
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 2e-05
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.052
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 32 0.28
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.64
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.64
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.64
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.1
SB_5381| Best HMM Match : PAN (HMM E-Value=7.2e-05) 29 1.9
SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6) 29 2.6
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 29 3.4
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 28 5.9
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 5.9
SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06) 28 5.9
SB_1230| Best HMM Match : PAN (HMM E-Value=7.2e-05) 27 7.9
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 7.9
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 60.5 bits (140), Expect = 9e-10
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 468
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 469 TGSVTDLITYRGPANTSWESGASALEHAL 555
G + L + P W G A++ AL
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAAL 219
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 60.5 bits (140), Expect = 9e-10
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 468
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 469 TGSVTDLITYRGPANTSWESGASALEHAL 555
G + L + P W G A++ AL
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAAL 102
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/89 (39%), Positives = 47/89 (52%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 468
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 469 TGSVTDLITYRGPANTSWESGASALEHAL 555
G + L + P W G ++ AL
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAAL 234
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 58.4 bits (135), Expect = 4e-09
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +1
Query: 271 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 450
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 451 LMRGKLTGSVTDLITYRGPANTSWESGASALEHAL 555
RG G + L + P W G +++ AL
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVAL 287
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +1
Query: 346 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRGPANTSWE 525
A+F D ++ PGFA F AA EE HA +++L RG G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRV-KLHHIMKPCRDHWG 57
Query: 526 SGASALEHAL 555
+G A+ AL
Sbjct: 58 NGLMAMRDAL 67
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 271 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATK 435
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 429
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 34.7 bits (76), Expect = 0.052
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 403 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRGPANTSWESGASALEHAL 555
A+ EEREHA KL + L RG G + L + P W G A++ AL
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAAL 49
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHA 429
+F D +N PGF K F A+ EE EHA
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHA 58
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 492
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 237 RHHQG*VAHHGADLLQHDEETDPGGSG 317
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_5381| Best HMM Match : PAN (HMM E-Value=7.2e-05)
Length = 306
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 147 EIK-MRAVFFGCPLTRCCPSSCHSYTVLRQPRHHQG*VAHHGADLLQHDEETDPGGSGRV 323
E+K M A +F P PS C YTVL +P + + D++ D +
Sbjct: 170 EVKNMDATYFENPKRAPAPSECIDYTVLSEP--------DRNINYVNTDDKCDNSLGTKW 221
Query: 324 NPVLSHGGLLLDRYGEPPRLR 386
GG +L Y E PRLR
Sbjct: 222 YRFTGDGGTMLPTY-EVPRLR 241
>SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6)
Length = 433
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +1
Query: 325 IQYLAMG--AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGK--LTGSVTDLI 492
I +LA G AYF +D RPG A + + +L+ Y L R + L G + D
Sbjct: 193 IVWLASGRVAYFFLDYSKRPGIAAIVIVGGCFVVQPLIQLMHYGLYRARIWLQGVLLDGT 252
Query: 493 TYRG---PANTSWESGASA 540
+ RG NT++ +G A
Sbjct: 253 SVRGGGEGVNTAYSNGRDA 271
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 409 TEEREHATKLIDYLLMRGKLTGSVTDLITYRGP 507
++ RE A + I L+ LTGS T++I RGP
Sbjct: 1841 SDHREQAAQEIQAFLLDMILTGSKTEIIELRGP 1873
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.9 bits (59), Expect = 5.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 349 YFSIDTVNRPGFAKLFFDAATEEREHA 429
+F + + N+PG ++ FDAA + R ++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNS 164
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 150 IKMRAVFFGCPLTRCCPSS 206
I MR FFGCPL C S+
Sbjct: 5378 ISMRVEFFGCPLAGLCNSA 5396
>SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06)
Length = 421
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 111 FLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQPRHHQG*VAHHGADLLQHD 290
F+ ++ V+IRE + AV L R PSS H + HHQ + + H
Sbjct: 158 FVIAEQDKVVIREHIIEAVISAPDLIRVMPSSSH-IIIKSWSHHHQVMSSPSHVIIKSHH 216
Query: 291 EETDPGGS 314
+ P S
Sbjct: 217 HQVTPSSS 224
>SB_1230| Best HMM Match : PAN (HMM E-Value=7.2e-05)
Length = 174
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 147 EIK-MRAVFFGCPLTRCCPSSCHSYTVLRQP 236
E+K M A +F P PS C YTVL +P
Sbjct: 115 EVKNMDATYFENPKRAPAPSECIDYTVLSEP 145
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 288 DEETDPGGSGRVNPVLSHGGLLLDRYGEP 374
D DPGG R++ + HGG +DR G P
Sbjct: 226 DRPMDPGGP-RMDHPMGHGGPPMDRGGPP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,115,340
Number of Sequences: 59808
Number of extensions: 350976
Number of successful extensions: 853
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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