Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0243
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 58 3e-09
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 49 3e-06
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 5.2
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 5.2
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 5.2
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 5.2
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 5.2
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 58.4 bits (135), Expect = 3e-09
Identities = 37/89 (41%), Positives = 47/89 (52%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 468
+ KQI E+ AS YL+M YF D V P AK F + + EEREHAT+L+ +RG
Sbjct: 16 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG-- 73
Query: 469 TGSVTDLITYRGPANTSWESGASALEHAL 555
G V L + P N W + A E AL
Sbjct: 74 -GRVV-LQDIQKPENDEWGTALKAFEAAL 100
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/89 (35%), Positives = 45/89 (50%)
Frame = +1
Query: 289 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 468
+ KQI E+ AS YL+M A+F D + AK F + + EER HAT+L+ +RG
Sbjct: 16 VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRG-- 73
Query: 469 TGSVTDLITYRGPANTSWESGASALEHAL 555
G V + + P W + A E AL
Sbjct: 74 -GRVA-MQNIQKPEKDEWGTVLEAFEAAL 100
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 666
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 606 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 664
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 666
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 666
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 606 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 664
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 666
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 60 VCVKA*VIQLLLSRAHIFLSIVKESVIIREIKMRAVFFGCPLTRCCPSSCHSYTVLRQP 236
+C +A +I L HI++ + + + IK+ + FG + R P+S T+ +P
Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRP 666
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,333,816
Number of Sequences: 27780
Number of extensions: 242522
Number of successful extensions: 642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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