BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0241 (304 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 22 4.4 AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 22 5.9 CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 21 7.8 >AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein protein. Length = 814 Score = 22.2 bits (45), Expect = 4.4 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = -3 Query: 173 NSFFILRWRVVFREALIQRTWQ*KWTSRFLE 81 N F +W+ + RE T+ W SR E Sbjct: 110 NIFLTTKWQQLLRELANLATYLIPWESRIKE 140 >AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. Length = 1036 Score = 21.8 bits (44), Expect = 5.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 Query: 242 FFRYCQTNGELLRSRQRRKV 183 F R C+T E L +QRRKV Sbjct: 697 FERSCRTIIEQLLDQQRRKV 716 >CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein protein. Length = 615 Score = 21.4 bits (43), Expect = 7.8 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -2 Query: 279 CLCKNQSQRDTVIFPILS 226 CLC + +R + PIL+ Sbjct: 5 CLCSKEKKRPQISSPILN 22 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 253,181 Number of Sequences: 2352 Number of extensions: 3960 Number of successful extensions: 7 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 563,979 effective HSP length: 55 effective length of database: 434,619 effective search space used: 19557855 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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