Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0237
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.4  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 3/15 (20%)
 Frame = -3

Query: 359 PRFHQFFPT---YPA 324
           PRFH +FPT   YPA
Sbjct: 74  PRFHAYFPTANSYPA 88


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 501 RRNPSLILIRQDLVGLTLYRLRSTIHKHPPD 409
           R  P+L  +  ++   T+  LR+T  + PPD
Sbjct: 69  RMKPALFSVLCEIKEKTVLSLRNTQEEEPPD 99


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 358 GCWAASTASAPAVFRVCIRRV 420
           G W  S  SA  +F VC  RV
Sbjct: 140 GDWFTSRTSACGLFSVCYPRV 160


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 269 YSAKDLSLRQKRCNE 313
           Y AKDL  ++++CN+
Sbjct: 476 YYAKDLEKQRQQCNQ 490


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 359 PRFHQFFPTYPADPLLHYI 303
           P FH  +  YPA+   H++
Sbjct: 438 PAFHNQYAHYPAEYYGHHL 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,389
Number of Sequences: 336
Number of extensions: 2858
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)