Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0237
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 46 2e-05
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 46 3e-05
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 44 6e-05
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 44 6e-05
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 44 8e-05
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 43 1e-04
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 43 1e-04
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 43 1e-04
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 43 1e-04
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 43 2e-04
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 43 2e-04
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 43 2e-04
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 43 2e-04
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 43 2e-04
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 42 3e-04
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 42 3e-04
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 42 3e-04
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 42 4e-04
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 42 4e-04
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 42 4e-04
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 41 6e-04
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 41 8e-04
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 41 8e-04
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 40 0.001
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 40 0.001
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 40 0.001
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 40 0.001
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 40 0.001
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05) 40 0.002
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 40 0.002
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 36 0.017
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073) 36 0.017
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 36 0.022
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 36 0.022
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 35 0.038
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 35 0.038
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 35 0.050
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 34 0.067
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.067
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.088
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 34 0.088
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.20
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 32 0.27
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14) 32 0.27
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 32 0.27
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 32 0.27
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 31 0.62
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 31 0.62
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 31 0.62
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 31 0.82
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 30 1.1
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 30 1.1
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 30 1.1
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 30 1.4
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 30 1.4
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 30 1.4
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 30 1.4
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 30 1.4
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 30 1.4
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 29 1.9
SB_253| Best HMM Match : GRP (HMM E-Value=0.61) 29 1.9
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.5
SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05) 29 2.5
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 29 2.5
SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048) 29 3.3
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 29 3.3
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 29 3.3
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 29 3.3
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 29 3.3
SB_34523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014) 28 4.4
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 28 5.8
SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9354| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18) 28 5.8
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 28 5.8
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 27 7.6
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 27 7.6
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + L +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQGL 407
IC +C + +P+LL CLHSFC SC++GL
Sbjct: 61 ICRVCNQRFNKPKLLHCLHSFCQSCIEGL 89
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 17 EVTCSICIEHFDDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 70
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C +C + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 132 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCKSEFQISP 185
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C +C + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C +C + +PR+L CLHSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQGLHQE 416
ICG+CR+ +PR+ CLHSFC C+ L E
Sbjct: 404 ICGVCRETYTDPRVAPCLHSFCKECVTKLVTE 435
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACEL 431
E C IC + +PR+L CLHSFC CL+ L H EG +L
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKL 52
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACEL 431
E C IC + +PR+L CLHSFC CL+ L H EG +L
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKL 52
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
K + E C IC + +PRLL CLH+FC CL+ L
Sbjct: 7 KQLEDEVTCAICIEHFTDPRLLPCLHTFCRHCLEDL 42
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 228 NSPLRTRPASQSLSIAPRTSAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
NSP+ P ++ ++ D+KD+ +++ C IC + LVEP +L C H FC C
Sbjct: 6 NSPVPFSPGKALITGLVDSTQQDEKDI-EDFTCPICLQLLVEPVVLPCEHEFCKMCFTQN 64
Query: 408 HQE 416
QE
Sbjct: 65 VQE 67
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACEL 431
E C IC + +PR+L CLHSFC CL+ L H EG +L
Sbjct: 11 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKL 51
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 11 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 64
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
C IC + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 15 CSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
+ KE C IC + +PR+L CLH+FC CL GL
Sbjct: 10 LQKEVECPICLERFKDPRVLPCLHTFCYECLVGL 43
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
+ KE C IC + +PR+L CLH+FC CL GL
Sbjct: 10 LQKEVECPICLERFKDPRVLPCLHTFCYECLVGL 43
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/29 (62%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 321 ICGICRKELV--EPRLLGCLHSFCTSCLQ 401
ICGICRK P+LL CLHSFC CL+
Sbjct: 21 ICGICRKSSATSNPKLLPCLHSFCFGCLE 49
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACELWSEVDRESIQQDP 470
E C +C + +PR+L C HSFC CL+ L H EG +L + + Q P
Sbjct: 12 EVTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCKAEFQISP 65
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 294 DKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEG 419
+K +K+ C +C ++ +PR+L CLH++C CL+ L H +G
Sbjct: 6 EKVGDVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQG 49
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 41.5 bits (93), Expect = 4e-04
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCL 398
+CGIC++ P++L CLHSFC +CL
Sbjct: 16 VCGICQETYNNPKVLPCLHSFCQNCL 41
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACEL 431
E C IC + +PR+L C HSFC CL+ L H EG +L
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKL 52
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 315 EWICGICRKELVEPRLLGCLHSFCTSCLQGL--HQEGACEL 431
E C IC + +PR+L C HSFC CL+ L H EG +L
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKL 52
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 303 DVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQE 416
++ K C +C + + P+LL CLHSFC +CL+ L E
Sbjct: 13 ELSKHLNCSLCHRLIRGPKLLPCLHSFCLACLEDLVTE 50
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 294 DKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG-ACELWSEVDRESIQ 461
+K +K+ C +C ++ +PR+L CLH++C CL+ L + C + RE I+
Sbjct: 6 EKVGDVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIE 62
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQ 413
V +E C +C ++ EP++L C H+FC CL+ Q
Sbjct: 16 VREELTCSVCLEQFREPKMLPCFHTFCKECLEKTKQ 51
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +3
Query: 294 DKK--DVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLH--QEGA 422
DKK D+ +E C C +PRLL CLHS C CL+ + QEGA
Sbjct: 9 DKKLEDLPEEIWCRYCNGIFEDPRLLPCLHSLCKKCLKDIEQAQEGA 55
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQG-LHQEG 419
+ + ++ +C +C E P LL C HSFC C+Q LHQ G
Sbjct: 12 RGLAEQLMCPVCLGEYKNPMLLRCYHSFCLRCVQELLHQSG 52
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
KDV + C +C ++ +PR+L CLH++C CL+ L
Sbjct: 10 KDV-SDVTCSLCLEQYQDPRVLACLHTYCRHCLESL 44
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGLHQEG-ACELWSEVDRESIQ 461
C +C ++ +PR+L CLH++C CL+ L + C + RE I+
Sbjct: 26 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIE 72
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
KDV + C +C ++ +PR+L CLH++C CL+ L
Sbjct: 10 KDV-SDVTCSLCLEQYQDPRVLACLHTYCRHCLESL 44
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 282 TSAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
TS +KD K+ C +C +PRLL CLH++C CL+ L
Sbjct: 3 TSTPQEKDE-KDVTCLLCLDIFTDPRLLPCLHTYCKKCLEDL 43
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGL 407
C +C + PRLL CLH+FC CL+ L
Sbjct: 145 CPLCHEMFANPRLLPCLHTFCKRCLENL 172
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG-ACELWSEVDRESIQ 461
KDV + C +C + +PR+L CLH++C CL+ L + C + RE I+
Sbjct: 10 KDV-SDVTCSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIE 63
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGLH 410
C C K EP++L CLH+FC CL G H
Sbjct: 16 CRACHKVFTEPKILDCLHTFCQKCL-GTH 43
>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
Length = 96
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQGLHQEGACELWSEVDRESI 458
+C IC +E +P+ L C+H+ C CL+ + + A + +D + +
Sbjct: 21 VCPICEEEYDDPKRLPCMHTICLGCLESMVPKNALIMKCPIDEQEL 66
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 303 DVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
D+ ++ CGIC L + R+L CLH++C C++ +
Sbjct: 138 DIRQQLACGICHALLRDARVLPCLHTYCRRCIEDI 172
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 309 MKEWICGICRKELVEPRLLGCLHSFCTSCLQGL 407
+ E +C IC E EP+ L C+H C CL+ +
Sbjct: 16 LDELLCPICLDEFKEPKTLSCMHDLCRKCLEDM 48
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 37.9 bits (84), Expect = 0.005
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQ 401
C +C + L EP++L C H +C CLQ
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQ 39
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 37.5 bits (83), Expect = 0.007
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C +C K EP++L C H+FC CL
Sbjct: 98 CSLCHKTPSEPKILKCFHTFCNECL 122
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 291 YDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSC 395
Y V E++C CRK + P + GC H CT C
Sbjct: 7 YFDDPVPSEFLCSYCRKVYLHPLVTGCGHVLCTKC 41
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 36.3 bits (80), Expect = 0.017
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVE----PRLLGCLHSFCTSCLQGL 407
K ++ E CG+C++E E P+LL C H+ C +C+ L
Sbjct: 212 KVIIDECTCGVCQEEFNEKTRVPKLLHCSHTLCKACVSAL 251
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 36.3 bits (80), Expect = 0.017
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQG 404
+C ICR L EP + C HS+C++C+ G
Sbjct: 17 LCCICRDVLEEPLMAPCEHSYCSACVLG 44
>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
Length = 498
Score = 36.3 bits (80), Expect = 0.017
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVE----PRLLGCLHSFCTSCLQGL 407
K ++ E CG+C++E E P+LL C H+ C +C+ L
Sbjct: 315 KVIIDECTCGVCQEEFNEKTRVPKLLHCSHTLCKACVSAL 354
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCL-QGLHQEGACE 428
+C C P++L CLH+FC+ CL + LH++ CE
Sbjct: 14 VCPKCMNAYENPKVLPCLHTFCSQCLSEELHRD--CE 48
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 35.9 bits (79), Expect = 0.022
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQ 401
C C + +PR+L CLHS C +CL+
Sbjct: 19 CPACSNVIKDPRILPCLHSICKTCLE 44
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLGCLHSFCTSCL-QGLHQEGACELWSE 440
V ++ CGIC L +P + C H FC+ CL + + G C L E
Sbjct: 51 VEDDFKCGICFGVLEDPLVTTCGHVFCSQCLVHWIAENGTCPLTCE 96
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 SQSLSIAPRTSAYDKKDVMKEWI-CGICRKELVEPRLL-GCLHSFCTSCL 398
S++L ++ ++S + + + + C +C + +PR L CLHSFC CL
Sbjct: 44 SKTLRVSKQSSLKKLQRALNDELRCSVCYEVFSDPRTLTACLHSFCKECL 93
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 35.1 bits (77), Expect = 0.038
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQ 401
C IC + P++L CLH++C+ C++
Sbjct: 659 CPICSRPFKSPKILPCLHTYCSDCVK 684
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 34.7 bits (76), Expect = 0.050
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQG-LHQEGACEL 431
+++ E+ C +C++ + L C HSFC CLQ L + C +
Sbjct: 363 EEMEDEFSCIVCQELFIRATTLTCSHSFCEYCLQSWLRKRNTCPI 407
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 34.3 bits (75), Expect = 0.067
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 324 CGICRKELVEPRLLG-CLHSFCTSCL 398
CG+C L++P + CLH+FC SC+
Sbjct: 64 CGLCEGYLIKPTTITECLHTFCKSCI 89
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 312 KEWICGICRKELVEPRLL-GCLHSFCTSCLQGLHQEGACELWSEVDRES 455
+E C +C +EL EP+ L C H+ C CL + G E+ R S
Sbjct: 13 EELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRRS 61
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 33.9 bits (74), Expect = 0.088
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPRLLG-CLHSFCTSCLQGLHQEGACE 428
+++ E C IC ++ EP+ L C H+ C CL G+ ++ E
Sbjct: 17 ENIQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLE 60
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 33.9 bits (74), Expect = 0.088
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 315 EWICGICRKELVEPRLL-GCLHSFCTSCLQGL 407
E C +C ++ +EP+ L C H+ C CL+G+
Sbjct: 20 ECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGM 51
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPR-LLGCLHSFCTSCL 398
KD+ IC +C LV+ ++ CLHSFC SC+
Sbjct: 1358 KDLNPHIICVLCGGYLVDATTIVECLHSFCRSCI 1391
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C C PR+ CLHSFC CL
Sbjct: 16 CRQCSNVFKNPRITPCLHSFCAECL 40
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C IC L +P + C H FCT CL
Sbjct: 65 CPICLDPLDDPSITRCAHVFCTGCL 89
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSC-LQGLHQEGAC 425
C +CRK P + CLH FC +C LQ + C
Sbjct: 245 CIMCRKTFKNPVVTKCLHYFCEACALQHYKKNSKC 279
>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
Length = 1071
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGLHQEGACELWSEVDR 449
C C++ + +P LL CL S C SC Q Q+ +W+ + R
Sbjct: 119 CPSCKETMNDPVLLPCLDSICRSCCQKSAQKHG-NMWNVLCR 159
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 297 KKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQ 401
K +++ C C+ P+ L CLH+FC CL+
Sbjct: 9 KIGLIERLTCSACKGFYKNPKRLPCLHAFCCHCLK 43
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQ 401
+CGIC + L L C HSFC CL+
Sbjct: 17 LCGICAEVLERAVLTPCGHSFCGVCLE 43
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 KDVMKEWI-CGICRKELVEPRLL-GCLHSFCTSCLQGLHQEGACELWSEVDR-ESI 458
K V +E I C +C + EP +L C HS C CLQ + + L V R ES+
Sbjct: 14 KSVQREEISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVCRSESV 69
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQ 401
+C IC + +P L C HS+C C+Q
Sbjct: 29 MCAICHIVVKDPILTSCGHSYCKCCIQ 55
>SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 520 SLSYPDPAEPKPDPDSAGSCWIDSLSTSLH 431
+LSY D A P D D+ WI+ + TSLH
Sbjct: 154 ALSYEDNATPYKDHDTPIKTWINLIKTSLH 183
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.5 bits (68), Expect = 0.47
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C +CR+ +P + C H+FC +C+
Sbjct: 194 CPLCRRVFKDPVITSCGHTFCQACI 218
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 297 KKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQE 416
++++ K C C++ + P LL CL S C SC Q Q+
Sbjct: 18 RENLTKFITCPSCKETMNGPVLLPCLDSICRSCCQKTAQK 57
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 297 KKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQE 416
++++ K C C++ + P LL CL S C SC Q Q+
Sbjct: 18 RENLTKFITCPSCKETMNGPVLLPCLDSICRSCCQKTAQK 57
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 312 KEWICGICRKELVEP-RLLGCLHSFCTSCLQGLHQ 413
+E+ C IC+ +P ++ C H FC SCLQ L +
Sbjct: 22 EEYECPICQLAFRDPIQIEECGHRFCQSCLQELRR 56
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 255 SQSLSIAPRTSAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCL 398
S++L S + + ++ C +C L+EP C HSFC CL
Sbjct: 307 SENLENGDIRSPASNTEQLDDFECKLCFNLLLEPVTSLCGHSFCRDCL 354
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQ 401
CG+C V+P + C H++C +C++
Sbjct: 22 CGLCGDFYVDPVTILCGHTYCLACIK 47
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 213 SISAGNSPLRTRPASQSLSIAPRTSAYDKKDVMKEWICGICRKELVEPR---LLGCLHSF 383
S+S N L+ Q+ I D V KE CGIC + E + L+ C HSF
Sbjct: 278 SVSEANEKLQQDLVKQA-KIRSGIDTRDWFMVSKE--CGICFGDFRENKMTALMSCGHSF 334
Query: 384 CTSC 395
CT C
Sbjct: 335 CTEC 338
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 157 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGGKHPACPICQETL 216
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 217 ADPNDLQRAP 226
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 153 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETL 212
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 213 ADPNDLQRAP 222
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 61 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETL 120
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 121 ADPNDLQRAP 130
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 159 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETL 218
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 219 ADPNDLQRAP 228
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 304 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETL 363
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 364 ADPNDLQRAP 373
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPR-LLGCLHSFCTSCL 398
K++ IC +C LV+ ++ CLHSFC C+
Sbjct: 40 KELNPHIICVLCGGYLVDATTIIECLHSFCRCCI 73
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 354 PRLLGCLHSFCTSCLQGLHQ 413
PR+L C H+FCT C+ + +
Sbjct: 346 PRILDCSHTFCTECIMKIKE 365
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 300 KDVMKEWICGICRKELVEPR-LLGCLHSFCTSCL 398
K++ IC +C LV+ ++ CLHSFC C+
Sbjct: 8 KELNPHIICVLCGGYLVDATTIIECLHSFCRCCI 41
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 103 TERFDFFETKKEEFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETL 162
Query: 441 VDRESIQQDP 470
D +Q+ P
Sbjct: 163 ADPNDLQRAP 172
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 303 DVMKEWICGICRKELVEPRLL-GCLHSFCTSCLQGLHQE 416
D ++IC +C ++ P ++ C HS C+SC + ++++
Sbjct: 49 DAPDDFICNVCGTVMLVPVVMPNCGHSCCSSCAERVNRK 87
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 303 DVMKEWICGICRKELVEPRLL-GCLHSFCTSCLQGLHQE 416
D ++IC +C ++ P ++ C HS C+SC + ++++
Sbjct: 49 DAPDDFICNVCGTVMLVPVVMPNCGHSCCSSCAERVNRK 87
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C IC++ L +P C H FC C+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C IC++ L +P C H FC C+
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCI 58
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C IC++ L +P C H FC C+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCL 398
C IC++ L +P C H FC C+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG----ACELWSE-- 440
T +D + KE + C IC L +P C HS C+ C + + G AC + E
Sbjct: 103 TERFDFFETKKEEFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETL 162
Query: 441 VDRESIQQDP 470
D +Q P
Sbjct: 163 ADPNDLQHAP 172
>SB_253| Best HMM Match : GRP (HMM E-Value=0.61)
Length = 356
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 331 YVGK---NWWNRGCWAASTASAPAVFRVCIRRVL 423
YVGK +WW G W A A F +R++L
Sbjct: 95 YVGKGNGDWWKEGAWTCHMGPAGAAFAGPVRQLL 128
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 531 NVSSHSRIRIRRNPSLILIRQDLVGLTLYRLR 436
+VS H +R + P I Q L G T+YR+R
Sbjct: 3258 SVSGHVSVRSKSGPVQSYILQGLAGFTVYRIR 3289
>SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05)
Length = 1442
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 264 LSIAPRTSAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSC 395
L++ TS D+K MK+ C + L E + + L + T C
Sbjct: 1126 LTVTEETSELDRKARMKQLTCYLAEYTLFEQKFVEALMEYATRC 1169
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG 419
T +D + KE + C IC L +P C HS C+ C + + G
Sbjct: 301 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELG 347
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 282 TSAYDKKDVMKE-WICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG 419
T +D + KE + C IC L +P C HS C+ C + + G
Sbjct: 627 TERFDFFETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELG 673
>SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)
Length = 233
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 285 SAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQ 401
+A+ +K V + + C C+ ++ P CLH+ C CLQ
Sbjct: 93 TAFHQK-VEELFACVCCQDLVLYPVTTKCLHNICKGCLQ 130
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 324 CGICRKELVEPRLL-GCLHSFCTSCL 398
C IC + + P L GC H+FC C+
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCI 703
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQ 401
C IC+ L EP C H C SC +
Sbjct: 34 CTICKHVLQEPLQTTCGHRICESCFE 59
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 324 CGICRKELVEPRLL-GCLHSFCTSCL 398
C IC + + P L GC H+FC C+
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCI 778
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 324 CGICRKELVEPRLLGCLHSFCTSCLQGL 407
C +C ++ P L C H FC C++G+
Sbjct: 71 CPVCLQQASYPVRLPCGHMFCFLCIKGV 98
>SB_34523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 423 KHPPDADPEDSWCRSCGG-SPAASVPPILSYISRRSTPS 310
K PDA P WC + P S PPI SR P+
Sbjct: 140 KSLPDATPGAVWCENYAVLPPIESAPPITGLYSRHLQPT 178
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 312 KEWICGICRKELVEPRLLGCLHSFCTSCLQGLHQEG 419
+E+ C IC L +P C HS C+ C + G
Sbjct: 21 EEFHCAICLDVLEKPLSSKCQHSCCSDCWESAFDLG 56
>SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014)
Length = 413
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLGCLHSF 383
V E C +C + +PR+L CL SF
Sbjct: 70 VEDEVTCSLCIEHFTDPRVLHCLRSF 95
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 321 ICGICRKELVEPRLLGCLHSFCTSCLQ 401
+C IC L C HSFC SCL+
Sbjct: 17 LCNICVGVLENAITTICGHSFCESCLE 43
>SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -1
Query: 523 KSLSYPDPAEPKPDPDSAGSCWIDSLSTSLHNSQAPS*CRP*RQLVQKLWRQPSSLGSTN 344
K P P +P PD ++ W S+S + S CR R+L+ + + + LG T
Sbjct: 45 KKKRIPTP-KPYPDRHTSRGVWSYSMSAGVFYSWQGHPCRTGRKLITETRSRANLLGKTV 103
Query: 343 SFLH 332
+ H
Sbjct: 104 AASH 107
>SB_9354| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18)
Length = 386
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 285 SAYDKKDVMKEWICGICRKELVEPRLLGCLHSFCTSCLQG-LHQEGACELWSEVDRESIQ 461
S YD+ K C IC KE + H T +G HQE C L +D E I+
Sbjct: 183 SKYDEDQFQKAQECHICNKEYTKKDTRVRDHCHITGKYRGSAHQE--CNLKLRIDPEEIK 240
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 VMKEWICGICRKELVEPRLLG-CLHSFCTSCLQGLHQE 416
+ +E C IC + P+ L C H+ C SCL+ + E
Sbjct: 16 LQEEICCPICTEIFETPKCLPVCAHNVCLSCLKKMKIE 53
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 309 MKEWICGICRKELVEPRLLGCLHSFCTSCL-QGLHQEGACEL 431
++E+ C +C + P C H FC +CL + L C +
Sbjct: 374 VEEFECTLCCRLFYNPVTTPCGHVFCRACLNRSLDHRPGCPI 415
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +3
Query: 324 CGICRKELVE----PRLLGCLHSFCTSCLQGLHQ 413
C IC E + P L C H+ C +CL LH+
Sbjct: 14 CPICYHEFEDRQRGPISLACGHTICKACLSQLHK 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,729,456
Number of Sequences: 59808
Number of extensions: 383222
Number of successful extensions: 1446
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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