Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0234
(563 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071740-1|AAH71740.1| 312|Homo sapiens cytokine induced apopto... 42 0.001
BC067303-1|AAH67303.1| 312|Homo sapiens cytokine induced apopto... 42 0.001
BC024196-1|AAH24196.1| 312|Homo sapiens cytokine induced apopto... 42 0.001
BC002568-1|AAH02568.1| 312|Homo sapiens cytokine induced apopto... 42 0.001
AF248964-1|AAG44562.1| 312|Homo sapiens CUA001 protein. 42 0.001
AC004382-5|AAC24311.1| 312|Homo sapiens Unknown gene product pr... 42 0.001
BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1 (Dros... 31 3.7
BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1 (Dros... 31 3.7
AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK056189-1|BAB71116.1| 417|Homo sapiens se I.2 (MGAT1.2) mRNA. ... 31 3.7
AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting l... 31 3.7
>BC071740-1|AAH71740.1| 312|Homo sapiens cytokine induced apoptosis
inhibitor 1 protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>BC067303-1|AAH67303.1| 312|Homo sapiens cytokine induced apoptosis
inhibitor 1 protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>BC024196-1|AAH24196.1| 312|Homo sapiens cytokine induced apoptosis
inhibitor 1 protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>BC002568-1|AAH02568.1| 312|Homo sapiens cytokine induced apoptosis
inhibitor 1 protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>AF248964-1|AAG44562.1| 312|Homo sapiens CUA001 protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>AC004382-5|AAC24311.1| 312|Homo sapiens Unknown gene product
protein.
Length = 312
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 GDNVLIIWKNDSQGN-ITSLIEDVKKVIQSD-TVVLENSDMITEGSREHSSFDVVLSNWL 351
G V ++W S + L++ ++ + ++ V +EN + + + + SSFD++LS +
Sbjct: 9 GQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 68
Query: 352 PPHSVSHSDXXXXXXXXXXXPNGKLILKD--------------LNKLTSTLKLNGFVNVT 489
P + HS P G L LK+ +KL S L L+G V V
Sbjct: 69 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVK 128
Query: 490 ELENNRYVAEK 522
EL+ E+
Sbjct: 129 ELQREPLTPEE 139
>BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 171 EKRRQCSYYLEERQSRKHYEPNRRRKKSNS 260
E+ R+ Y EER SR H+ RR +KS S
Sbjct: 654 ERTRRRVYNFEERGSRSHHHRRRRSRKSRS 683
>BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 171 EKRRQCSYYLEERQSRKHYEPNRRRKKSNS 260
E+ R+ Y EER SR H+ RR +KS S
Sbjct: 654 ERTRRRVYNFEERGSRSHHHRRRRSRKSRS 683
>AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens
cDNA FLJ31937 fis, clone NT2RP7006527, moderately
similar to LIM-ONLY PROTEIN 6. ).
Length = 831
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 171 EKRRQCSYYLEERQSRKHYEPNRRRKKSNS 260
E+ R+ Y EER SR H+ RR +KS S
Sbjct: 654 ERTRRRVYNFEERGSRSHHHRRRRSRKSRS 683
>AK056189-1|BAB71116.1| 417|Homo sapiens se I.2 (MGAT1.2) mRNA.
protein.
Length = 417
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 171 EKRRQCSYYLEERQSRKHYEPNRRRKKSNS 260
E+ R+ Y EER SR H+ RR +KS S
Sbjct: 240 ERTRRRVYNFEERGSRSHHHRRRRSRKSRS 269
>AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting lim
domain protein protein.
Length = 831
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 171 EKRRQCSYYLEERQSRKHYEPNRRRKKSNS 260
E+ R+ Y EER SR H+ RR +KS S
Sbjct: 654 ERTRRRVYNFEERGSRSHHHRRRRSRKSRS 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,291,927
Number of Sequences: 237096
Number of extensions: 1470437
Number of successful extensions: 3389
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3385
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -