Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0234
         (563 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060402-1|AAL25441.1|  248|Drosophila melanogaster LD32407p pro...    45   6e-05
AE014134-2554|AAF53433.1|  248|Drosophila melanogaster CG4180-PA...    45   6e-05
AY094947-1|AAM11300.1|  233|Drosophila melanogaster RH63449p pro...    33   0.35 
AE014134-1611|AAF52752.1|  233|Drosophila melanogaster CG13108-P...    33   0.35 

>AY060402-1|AAL25441.1|  248|Drosophila melanogaster LD32407p
           protein.
          Length = 248

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
 Frame = +1

Query: 160 MDNLKNGDNVLIIWKNDSQGNITSLIEDVKKVIQSDTVVLENSDMITEGSREHSSFDVVL 339
           M+N K     L IW + +  ++   +E +K     D V LEN   ++  S  +SSFD+++
Sbjct: 1   MENFKGLQKSLYIWTDSA--DLDKRVEQLKAATGGD-VALENVHRLSFSSYANSSFDLIV 57

Query: 340 SNWLPPHSVSHSDXXXXXXXXXXXPNGKLILKDL----NKLTSTLKLNGFVNVTELENNR 507
                    +              P+GKL L         L   +KL+GF+N  E   + 
Sbjct: 58  IE------CAQLTDSYVKLLHMLKPSGKLHLVSYIGPAASLLQEIKLSGFINCREDSPDA 111

Query: 508 YVAEKPKFEVGSKSSL 555
             AEKP +E GS + L
Sbjct: 112 LTAEKPGYETGSSARL 127


>AE014134-2554|AAF53433.1|  248|Drosophila melanogaster CG4180-PA
           protein.
          Length = 248

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
 Frame = +1

Query: 160 MDNLKNGDNVLIIWKNDSQGNITSLIEDVKKVIQSDTVVLENSDMITEGSREHSSFDVVL 339
           M+N K     L IW + +  ++   +E +K     D V LEN   ++  S  +SSFD+++
Sbjct: 1   MENFKGLQKSLYIWTDSA--DLDKRVEQLKAATGGD-VALENVHRLSFSSYANSSFDLIV 57

Query: 340 SNWLPPHSVSHSDXXXXXXXXXXXPNGKLILKDL----NKLTSTLKLNGFVNVTELENNR 507
                    +              P+GKL L         L   +KL+GF+N  E   + 
Sbjct: 58  IE------CAQLTDSYVKLLHMLKPSGKLHLVSYIGPAASLLQEIKLSGFINCREDSPDA 111

Query: 508 YVAEKPKFEVGSKSSL 555
             AEKP +E GS + L
Sbjct: 112 LTAEKPGYETGSSARL 127


>AY094947-1|AAM11300.1|  233|Drosophila melanogaster RH63449p
           protein.
          Length = 233

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 130 IIVKNPVLTNMDNLKNGDNVLIIWKNDSQGNITSLIEDVKKVIQSDTVVLENSDMITE-G 306
           ++VK   L   D LKN  N L +W+ D Q N+      VK   + + ++  +S + +   
Sbjct: 115 LLVKKSDLMENDWLKN--NRLCLWRKDEQTNLLQKYLRVKSAAEEEELLFTSSSVYSSWD 172

Query: 307 SREHSSFDVVLSNWLPPHS 363
            ++ S F  V  N L P++
Sbjct: 173 DQQTSDFIEVKVNCLDPNN 191


>AE014134-1611|AAF52752.1|  233|Drosophila melanogaster CG13108-PA
           protein.
          Length = 233

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 130 IIVKNPVLTNMDNLKNGDNVLIIWKNDSQGNITSLIEDVKKVIQSDTVVLENSDMITE-G 306
           ++VK   L   D LKN  N L +W+ D Q N+      VK   + + ++  +S + +   
Sbjct: 115 LLVKKSDLMENDWLKN--NRLCLWRKDEQTNLLQKYLRVKSAAEEEELLFTSSSVYSSWD 172

Query: 307 SREHSSFDVVLSNWLPPHS 363
            ++ S F  V  N L P++
Sbjct: 173 DQQTSDFIEVKVNCLDPNN 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,338,125
Number of Sequences: 53049
Number of extensions: 464517
Number of successful extensions: 1588
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)