Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0231
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16X76 Cluster: Putative uncharacterized protein; n=2; ...    34   1.8  
UniRef50_A1W5K5 Cluster: Cytosine-specific methyltransferase; n=...    33   3.2  
UniRef50_A0Q9G0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q3W3R9 Cluster: GGDEF; n=5; Frankia sp. EAN1pec|Rep: GG...    32   7.3  
UniRef50_Q8SRZ7 Cluster: TRANSCRIPTION FACTOR OF MYB-TYPE; n=1; ...    32   7.3  
UniRef50_UPI0001555A98 Cluster: PREDICTED: similar to interleuki...    32   9.7  
UniRef50_Q7MZL9 Cluster: Similar to unknown protein; n=1; Photor...    32   9.7  

>UniRef50_Q16X76 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 248

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +1

Query: 253 LLTCLMVYASSVHG-IMVKFGTKGGXXXXXXXXXXXXXXXXXXXXXXVWEERSNDAPDPN 429
           L+  L+ Y+++  G I V + T  G                      VWE++S+D P+PN
Sbjct: 5   LIGLLIAYSATQTGAIRVYWNTNTGPIVPPTTTPVPVPQPPFRDPAPVWEDQSDDVPNPN 64

Query: 430 AQWRPQPFKS*PRYTHIVYNVPTAPPLSLT 519
                 P  S P+Y  I  + P AP  S T
Sbjct: 65  PYVYILPPPSRPKYNDIPVSQP-APAASTT 93


>UniRef50_A1W5K5 Cluster: Cytosine-specific methyltransferase; n=9;
           Proteobacteria|Rep: Cytosine-specific methyltransferase
           - Acidovorax sp. (strain JS42)
          Length = 539

 Score = 33.5 bits (73), Expect = 3.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 379 LDTAAGEAATAQGPVARWAHPSCRTSP*CRVHW 281
           L   AGE+   Q P  RWAH  C + P  R+ W
Sbjct: 155 LAALAGESRALQPPGGRWAHAGCVSGPRRRIAW 187


>UniRef50_A0Q9G0 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium avium 104|Rep: Putative uncharacterized
           protein - Mycobacterium avium (strain 104)
          Length = 217

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = -3

Query: 406 TFLPKPVRELDTAAGEAATAQGPVARWAHPSCRTSP*CRV 287
           T  P P   +DTAA EAA AQG    +A P   T+P C V
Sbjct: 130 TTAPAPAAGMDTAAAEAAAAQGRPFIYAIPD-GTNPTCNV 168


>UniRef50_Q3W3R9 Cluster: GGDEF; n=5; Frankia sp. EAN1pec|Rep: GGDEF -
            Frankia sp. EAN1pec
          Length = 1652

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 355  ATAQGPVARWAHPSCRTSP*CR--VHWTRTPSGTSATVTS 242
            ATA+     WAHP+ RT P C   VH    PS   +TV +
Sbjct: 1238 ATAKVSQLDWAHPTLRTEPACEPVVHPPAAPSARRSTVAT 1277


>UniRef50_Q8SRZ7 Cluster: TRANSCRIPTION FACTOR OF MYB-TYPE; n=1;
           Encephalitozoon cuniculi|Rep: TRANSCRIPTION FACTOR OF
           MYB-TYPE - Encephalitozoon cuniculi
          Length = 400

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 436 IERWGLVRH*TFLPKPVRELDTAAGE 359
           +ERWGL+ H + L K +R  +T  GE
Sbjct: 122 VERWGLINHRSLLEKEIRYFETHKGE 147


>UniRef50_UPI0001555A98 Cluster: PREDICTED: similar to interleukin
           23 p19 subunit, partial; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to interleukin 23 p19
           subunit, partial - Ornithorhynchus anatinus
          Length = 708

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 385 RELDTAAGEAATAQGPVARWAHPSCRTSP*CRVHWTRTPSGTSA 254
           + L   A  AA A G  +RW     R +P  R+ WTR+PSGT A
Sbjct: 70  QRLPPGASHAAAAGGR-SRWTGAGGRAAPSPRL-WTRSPSGTRA 111


>UniRef50_Q7MZL9 Cluster: Similar to unknown protein; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep: Similar
           to unknown protein - Photorhabdus luminescens subsp.
           laumondii
          Length = 122

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = -1

Query: 507 RRSSWNVV---YDMRVSRLR-FEGLGSPLSVGVWCVIRP 403
           R+  W+ +   YD+  SRL  +EGL +P   G WC++RP
Sbjct: 6   RKMDWDSMVHEYDLDGSRLLPWEGLNTPFG-GAWCIVRP 43


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,338,855
Number of Sequences: 1657284
Number of extensions: 8675884
Number of successful extensions: 23301
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23296
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)