Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0231
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 202 K*RASVRRNMTSTTRLQLLTCLMVYASSV-HGIMVKFGTKG 321
           K R    RN+      QL+  + VY+SSV +   V+   KG
Sbjct: 120 KTRDQKERNLFKNAYFQLVLSISVYSSSVGYTQYVRIAAKG 160


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 440 DPSPSNLNLDTRISY 484
           DP    LNLDT+ SY
Sbjct: 136 DPDLKELNLDTKESY 150


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 465 RLRFEGLGSPLSVGVWCVIRP 403
           RL   GLG+     VWC   P
Sbjct: 606 RLVARGLGAEAMWPVWCAQNP 626


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 380 LPHRFGKKGLMTHQTPTLNGDPSPSNLNLDTRISYTT 490
           L +RFG+       +  ++  P P   +  TR + TT
Sbjct: 139 LSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTT 175


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 267 DGVRVQCTRHHGE 305
           DGV VQCT   G+
Sbjct: 619 DGVSVQCTVSKGD 631


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,584
Number of Sequences: 336
Number of extensions: 2036
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)