Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0229
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 54 7e-08
SB_30841| Best HMM Match : HLH (HMM E-Value=1.5) 51 4e-07
SB_57157| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.2) 30 1.0
SB_41264| Best HMM Match : TIL_assoc (HMM E-Value=0.87) 30 1.0
SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32) 29 1.8
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_51209| Best HMM Match : UBX (HMM E-Value=0.5) 27 5.3
SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1) 27 5.3
SB_34357| Best HMM Match : UBX (HMM E-Value=0.28) 27 5.3
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 5.3
SB_43472| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 9.3
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 27 9.3
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/137 (27%), Positives = 57/137 (41%)
Frame = +2
Query: 35 RRTSNATRHKSRDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRAR 214
++T+ + + +DLQ + +ERR+ L ELE+ R LEQADRAR
Sbjct: 1676 QKTTKKLQQQVKDLQLMVEEEQRGRDDARESAARAERRSAELAAELEDLRNQLEQADRAR 1735
Query: 215 RQAEQELSDAHEXXXXXXXXXXXXXXXXXXXXXELQTLHSDLDELLXXXXXXXXXXXXXM 394
R A+QE +DA + ++ T+ +LD+
Sbjct: 1736 RTADQERADAVDRLAEVSNQVNNLQQGKRKLEGQVNTMQEELDDAENEAKAADERSKKAA 1795
Query: 395 VDAARLADELRAEQDHA 445
+ AR EL + QDHA
Sbjct: 1796 AEFARAQAELVSAQDHA 1812
>SB_30841| Best HMM Match : HLH (HMM E-Value=1.5)
Length = 189
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/103 (32%), Positives = 46/103 (44%)
Frame = +2
Query: 137 SERRANALQNELEESRTLLEQADRARRQAEQELSDAHEXXXXXXXXXXXXXXXXXXXXXE 316
+ERR+ L ELE+ R LEQADRARR A+QE +DA + +
Sbjct: 14 AERRSAELAAELEDLRNQLEQADRARRTADQERADAVDRLAEVSNQVNNLQQGKRKLEGQ 73
Query: 317 LQTLHSDLDELLXXXXXXXXXXXXXMVDAARLADELRAEQDHA 445
+ T+ +LD+ + AR EL + QDHA
Sbjct: 74 VNTMQEELDDAENEAKAADERSKKAAAEFARAQAELVSAQDHA 116
>SB_57157| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.2)
Length = 334
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 158 LQNELEESRTLLEQADRARRQAEQELSDAH 247
+Q E E R + A+R R+ + ELS+AH
Sbjct: 204 IQEEYETQRAIANSAERINRRLKDELSEAH 233
>SB_41264| Best HMM Match : TIL_assoc (HMM E-Value=0.87)
Length = 770
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 81 PLSRRSSAPVTMPANSSASRSVAPMLFRTNWKSPAHS 191
PL S +PVT S A +S L R NW S H+
Sbjct: 308 PLMGTSGSPVTNDGTSRADKSFPTELSRHNWPSIGHA 344
>SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + +LE ES + ++ DR R + EQEL+ A E
Sbjct: 221 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTXAEE 264
>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
Length = 311
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 140 ERRANALQN--ELEESRTLLEQADRARRQAEQELSDAHE 250
ER+AN + +LEES + ++ DR R + EQEL+ E
Sbjct: 63 ERKANFKEQLEQLEESSKIDKEKDRLRLEEEQELTKQEE 101
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 170 LEESRTLLEQADRARRQAEQELSDAHE 250
LEE R LE ++ R+ A+Q + +AH+
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEAHD 345
>SB_51209| Best HMM Match : UBX (HMM E-Value=0.5)
Length = 272
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNEL---EESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + +L EES + ++ DR R + EQEL+ E
Sbjct: 38 IGTSEERKAIFKEQLKQLEESSRIDKEKDRLRLEEEQELTKQEE 81
>SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1)
Length = 205
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + +LE ES + ++ DR R + EQEL+ E
Sbjct: 35 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTKQEE 78
>SB_34357| Best HMM Match : UBX (HMM E-Value=0.28)
Length = 219
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNE---LEESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + + LEES + ++ DR R + EQEL+ E
Sbjct: 38 IGTSEERKAIFKEQREQLEESSRIDKEKDRLRLEEEQELTKQEE 81
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 137 SERRANALQNELEESRTLLEQADRARRQAEQELSD 241
SE R L+ E + R LLEQ R+ +ELSD
Sbjct: 2569 SESRIPKLRTEFDRERELLEQQINNYRRQIEELSD 2603
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 126 SSASRSVAPMLFRTNWKSPAHSWSRPTAPA 215
SS SRS + R+ +SP SWSR +P+
Sbjct: 414 SSRSRSYSRSASRSYSRSPVRSWSRSHSPS 443
>SB_43472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNE---LEESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + + LEES + ++ DR R + EQEL+ E
Sbjct: 58 IGTSEERKAIFKEQREQLEESSRIDKEKDRLRLEEEQELTKQEE 101
>SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + +LE ES + ++ DR R + EQEL+ E
Sbjct: 96 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTKQEE 139
>SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 657
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 137 SERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 250
+E R L +ELE + + +Q ++AR AEQ + E
Sbjct: 204 NEERVQTLTSELESTILIKQQQEKARLAAEQLVKQERE 241
>SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 LGISERRANALQNEL---EESRTLLEQADRARRQAEQELSDAHE 250
+G SE R + +L EES + ++ DR R + EQEL+ E
Sbjct: 231 IGTSEERKAIFKEQLKQLEESSRIDKEKDRLRLEEEQELTKQEE 274
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 30 GPEEHQTLPGTNQGICKPLSRRSSAPVTMPANSSASRSVA 149
G H L G +C PL +A P S+ SRS+A
Sbjct: 453 GAAPHGFLEGGETAVCPPLPGGGTAERLPPRQSAPSRSMA 492
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 48 TLPGTNQGICKPLSRRSSAPVTMPANSSASRSVA 149
TLPG G +PL+ P T+P S A + VA
Sbjct: 379 TLPG-GSGAVQPLTNTERYPNTLPGGSGAVQPVA 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.125 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,724,278
Number of Sequences: 59808
Number of extensions: 99423
Number of successful extensions: 408
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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