Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0227
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   1.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 199 VVNVACVCTKNANSVDHSRV 258
           +VNV  +C +  N+V+ SR+
Sbjct: 280 IVNVLYICNQCYNTVEESRI 299


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 304 RCSRCA*TGAPKCLYQLESGPRNS 233
           R  +C   G  K   Q E GPRNS
Sbjct: 96  RLKKCQNVGMNKDAVQHERGPRNS 119


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 304 RCSRCA*TGAPKCLYQLESGPRNS 233
           R  +C   G  K   Q E GPRNS
Sbjct: 96  RLKKCQNVGMNKDAVQHERGPRNS 119


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 109 PELQFSSAKLLEQCLTTENRAHVVENGLEKVVNV 210
           P+L    A   ++    E  A +VE GLE+ V V
Sbjct: 260 PDLTKYGAYSPKKVYAPEEVAEIVEYGLERGVRV 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,711
Number of Sequences: 336
Number of extensions: 2201
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)