Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0227
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   8.0  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 392  SRSVSKVSTSFFLHSNSTASRPPN--LMTSSQVLSL 291
            S+   K  + FF H+  T  +P N  ++ +S  +SL
Sbjct: 1142 SQPAGKQLSMFFFHTKETIQQPANVTMVRASNTISL 1177


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 70  LDILMANCLESNNPELQFSSAKLLEQCLTTENRAHVVENG 189
           L I ++NC  S N  LQ +  +  +  L +E   H   NG
Sbjct: 5   LQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNG 44


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 407  SSLEPSRSVSKVSTSF 360
            S+  PSRSV+++ TSF
Sbjct: 1318 SNSTPSRSVARIVTSF 1333


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,789
Number of Sequences: 2352
Number of extensions: 10394
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)