Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0225
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 89  ITPGIFDKAYSVFKPFLNDVMKSRIYFHGND 181
           I P +FD    ++   +N + K  I+  G D
Sbjct: 349 INPNVFDVLKLLYNDIVNMLPKGEIFHMGGD 379


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 146 VMKSRIYFHGNDVTSLHKHISPGLFTRKLWRCLAGLLLHY 265
           V+KS   F  N +    KH S   ++ +    +  LLL Y
Sbjct: 237 VLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKY 276


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 207 ARDYLPESYGGVWPDY 254
           A++Y P  YG + PDY
Sbjct: 302 AQNYAPTYYGQMQPDY 317


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 146 VMKSRIYFHGNDVTSLHKHISPGLFTRKLWRCLAGLLLHY 265
           V+KS   F  N +    KH S   ++ +    +  LLL Y
Sbjct: 237 VLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKY 276


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 183 TSLPWK*ILDFMTSFKNGLK 124
           T  PW  I D MT   NGL+
Sbjct: 204 TFYPWMAIADSMTFGANGLR 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,029
Number of Sequences: 336
Number of extensions: 2806
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)