Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0225
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   7.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   10.0 
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   10.0 

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 52  CYPTKIHAIHIINHSWDLRQSLQRF 126
           C PTK++ I ++ H  D   +L+++
Sbjct: 406 CAPTKLNPISVLYHIDDANINLKKY 430


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 56  TQRRYTRST*SITPGIFDKAYSVFKPFLND 145
           T RR +RST  + P  F +   + + FLN+
Sbjct: 389 TVRRSSRSTKGVPPQRFRETTGMVRIFLNE 418


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 56  TQRRYTRST*SITPGIFDKAYSVFKPFLND 145
           T RR +RST  + P  F +   + + FLN+
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFLNE 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,902
Number of Sequences: 2352
Number of extensions: 11369
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)