Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0224
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 5.9
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 5.9
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 5.9
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 28 5.9
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 5.9
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 5.9
Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 374 NFRNTNHRICTADFNLLERWN-----WKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPGLL 538
+F N +I T + ++E N N+ T + S+ YV+++ + + WK+++ +
Sbjct: 1229 DFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDKFM 1288
Query: 539 TP 544
P
Sbjct: 1289 NP 1290
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 374 NFRNTNHRICTADFNLLERWN-----WKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPGLL 538
+F N +I T + ++E N N+ T + S+ YV+++ + + WK+++ +
Sbjct: 1229 DFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDKFM 1288
Query: 539 TP 544
P
Sbjct: 1289 NP 1290
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 263 FWLLSRHGSHNPEANETAELQQLVDLKNNI 352
FW +H S +ANE A +D+++N+
Sbjct: 759 FWQKEKHESSRDDANENASFVHSLDVESNV 788
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 374 NFRNTNHRICTADFNLLERWN-----WKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPGLL 538
+F N +I T + ++E N N+ T + S+ YV+++ + + WK+++ +
Sbjct: 1229 DFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSETIGKLWKEQYDKFM 1288
Query: 539 TP 544
P
Sbjct: 1289 NP 1290
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LERWNWKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPG 532
L R W +S +GD S ++T QQ QA QR PG
Sbjct: 793 LVRAAW-DSSQESGDCQSYFFITGQQNGQAINQRVPG 828
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LERWNWKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPG 532
L R W +S +GD S ++T QQ QA QR PG
Sbjct: 793 LVRAAW-DSSQESGDCQSYFFITGQQNGQAINQRVPG 828
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LERWNWKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPG 532
L R W +S +GD S ++T QQ QA QR PG
Sbjct: 793 LVRAAW-DSSQESGDCQSYFFITGQQNGQAINQRVPG 828
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LERWNWKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPG 532
L R W +S +GD S ++T QQ QA QR PG
Sbjct: 793 LVRAAW-DSSQESGDCQSYFFITGQQNGQAINQRVPG 828
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LERWNWKQNSSTAGDLTSDGYVTTQQLAQAWKQRFPG 532
L R W +S +GD S ++T QQ QA QR PG
Sbjct: 793 LVRAAW-DSSQESGDCQSYFFITGQQNGQAINQRVPG 828
>Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical
protein C49F5.6 protein.
Length = 784
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 206 NRGIPNAKAHEVPGCQPVAFWLLSRHGSHNPEANETAELQQLVDLKNNIVTNYKNGNFRN 385
++ +PN + E P V + +G + + A + LV K+N NY + +
Sbjct: 86 SKSVPNILSGEYPNSVCVVANSIDENGDAGVDVTDCASTKPLVLGKDNYQDNYWDS--QE 143
Query: 386 TNHR 397
TNHR
Sbjct: 144 TNHR 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,788,530
Number of Sequences: 27780
Number of extensions: 277148
Number of successful extensions: 843
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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